spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA88969; SV 1; linear; genomic DNA; STD; INV; 843 BP.
XX
PA   Z49130.1
XX
DE   Caenorhabditis elegans C. elegans protein T06D8.6, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..843
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="II"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="T06D8"
FT   CDS             complement(join(Z49130.1:23214..23568,
FT                   Z49130.1:23614..23739,Z49130.1:23792..23940,
FT                   Z49130.1:23986..24171,Z49130.1:24225..24251))
FT                   /gene="cchl-1"
FT                   /locus_tag="T06D8.6"
FT                   /standard_name="T06D8.6"
FT                   /product="C. elegans protein T06D8.6, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans CCHL-1 protein; contains similarity to
FT                   Pfam domain PF01265 Cytochrome c/c1 heme lyase contains
FT                   similarity to Interpro domains IPR000511 (Cytochrome c/c1
FT                   haem-lyase), IPR016160 (Aldehyde dehydrogenase, conserved
FT                   site)"
FT                   /db_xref="GOA:P53703"
FT                   /db_xref="InterPro:IPR000511"
FT                   /db_xref="UniProtKB/Swiss-Prot:P53703"
FT                   /db_xref="WormBase:WBGene00011527"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA88969.1"
FT                   /translation="MGSSQSTPKVQDANADAERIRKAQHSMAAAGGGSQCPLTPEQRAA
FT                   ASGENCGAGGACPVGADKASINPLNNELEHPNQKPAPDQPFALPTKREKSTIPKAGTET
FT                   ETWTYPSPQMFWNAMLKKGWRWQDDSLSKSDMENIISIHNANNEEAWREVLKWENLLHP
FT                   ECAEPKLKSFKGDAKNLSPRARFRNLFLGYDLPFDRHDWIVDRCGTKQVQYVIDYYDGG
FT                   AVDPSSKLFTILDVRPAVNDIGNIWDRMVVAYWRFKFETLGFTPSLPIPPTEGHNVNH"
XX
SQ   Sequence 843 BP; 254 A; 202 C; 205 G; 182 T; 0 other; 3339188218 CRC32;
     atgggctctt cacaatcgac gccaaaggtg caagatgcca acgccgatgc tgagagaatt        60
     cgtaaggctc aacacagcat ggctgctgct ggaggaggat ctcaatgccc attaacacct       120
     gaacagagag ctgctgcatc tggagagaat tgtggagctg gtggcgcttg cccggttggt       180
     gctgacaagg cttctatcaa tccactcaac aatgagctcg aacatccaaa tcaaaagcca       240
     gccccagatc agccattcgc acttccaacg aaacgagaga agtctacaat cccgaaagct       300
     ggaacagaaa ctgaaacctg gacctatcca agtccccaaa tgttctggaa cgccatgctg       360
     aaaaaaggat ggagatggca agatgactcg ctgagcaaaa gcgacatgga aaacattatc       420
     agcatccata acgctaacaa cgaggaggca tggagagagg tgttgaaatg ggagaatctt       480
     cttcatccgg aatgcgcaga gccgaaactg aaaagcttca aaggagatgc caagaaccta       540
     tcgccaagag ctcgtttccg caacttgttc ctcggatacg atctcccatt cgatcgtcac       600
     gattggattg ttgatagatg cggaaccaag caagttcagt acgtcattga ctactacgat       660
     ggtggtgctg tggatccaag ctcaaagctt ttcactattc ttgatgttcg accggccgtg       720
     aatgatattg gaaacatctg ggatcgaatg gttgttgctt attggagatt caaattcgag       780
     acacttggat tcacaccgag cctgccgatt ccaccaactg aaggacacaa tgtcaaccat       840
     taa                                                                     843
//
spacer
spacer