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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA88946; SV 1; linear; genomic DNA; STD; INV; 1572 BP.
XX
PA   Z49127.1
XX
DE   Caenorhabditis elegans C. elegans protein F13D12.4a, confirmed by
DE   transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1572
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="II"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="F13D12"
FT   CDS             join(Z49127.1:20054..20080,Z49127.1:20241..20297,
FT                   Z49127.1:20352..20524,Z49127.1:20582..21089,
FT                   Z49127.1:21148..21597,Z49127.1:21652..22008)
FT                   /gene="alh-8"
FT                   /locus_tag="F13D12.4a"
FT                   /standard_name="F13D12.4a"
FT                   /product="C. elegans protein F13D12.4a, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans ALH-8 protein; contains similarity to
FT                   Pfam domain PF00171 Aldehyde dehydrogenase family contains
FT                   similarity to Interpro domains IPR016163 (Aldehyde
FT                   dehydrogenase, C-terminal), IPR016162 (Aldehyde
FT                   dehydrogenase, N-terminal), IPR015590 (Aldehyde
FT                   dehydrogenase), IPR016160 (Aldehyde dehydrogenase,
FT                   conserved site), IPR010061 (Methylmalonate-semialdehyde
FT                   dehydrogenase)"
FT                   /db_xref="GOA:P52713"
FT                   /db_xref="InterPro:IPR010061"
FT                   /db_xref="InterPro:IPR015590"
FT                   /db_xref="InterPro:IPR016160"
FT                   /db_xref="InterPro:IPR016161"
FT                   /db_xref="InterPro:IPR016162"
FT                   /db_xref="UniProtKB/Swiss-Prot:P52713"
FT                   /db_xref="WormBase:WBGene00000114"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA88946.1"
FT                   /translation="MLSRLARVQPKCQQLAHFSTSKSAAAAPTVKLWIDGQAVESKTTD
FT                   FVELTNPATNEVIAMVPNATQAEMQAAVDSAKNAFNTWKNTSPLTRQQCMFKLQALIKR
FT                   DMKKLAESITIEQGKTLPDAEGDVSRGLQVVEHACSVPSLMMGETLPNVSRDMDTHSYR
FT                   IPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPGAAQLLVELAKEAGVPD
FT                   GCVNIIHGQHSAVNFICDNPDIKAISFVGGDAAGKHIYERGAKNGKRVQSNMGAKNHGV
FT                   IMADANKEQTLNQLTAAAFGAAGQRCMALTTAVLVGEARAWLPELVEKAKNLKVNAGWK
FT                   PDTDIGPLISKQSKARVLRLIESAKKEGAQVPLDGSNITVPGFENGNFVGPTILAGVKP
FT                   NMTCYREEIFGPVLVVMEAENLNEAIEIINNNPYGNGTAIFTSNGATARKFTNEVDVGQ
FT                   IGINVPIPVPLPMFSFTGSRGSFLGDLNFYGKAGIQFYTQWKTVTQYWNESLTELKPQM
FT                   SFPQLK"
XX
SQ   Sequence 1572 BP; 422 A; 464 C; 373 G; 313 T; 0 other; 1284982012 CRC32;
     atgttgtctc gtcttgctcg tgttcagcca aaatgccaac agctcgccca cttcagcaca        60
     tcgaagtctg ctgccgccgc accaactgtc aagctgtgga tcgatggaca agctgttgaa       120
     tcgaagacca ccgacttcgt ggagctcacc aatccagcca ccaacgaggt catcgctatg       180
     gtgccaaacg ccacccaagc tgagatgcaa gccgctgttg actcggccaa gaatgccttc       240
     aacacctgga agaacacatc cccactgacc cgtcaacaat gcatgttcaa acttcaagcc       300
     ttgatcaaga gagacatgaa gaagctcgct gagagcatca ccattgagca aggaaagacc       360
     cttccagatg ccgagggaga cgtcagcaga ggtcttcagg tcgtcgagca cgcttgctcc       420
     gttccatccc tgatgatggg agagaccctt ccaaatgtct ctcgcgacat ggacacccac       480
     tcctacagaa tcccacttgg agtcaccgcc ggaatctgtc cattcaactt cccggctatg       540
     atcccattgt ggatgttccc agtcgccttg gccaccggaa acactatggt catcaagcca       600
     tccgagcagg atccaggagc agctcagctt cttgtcgaac ttgccaagga ggccggagtt       660
     ccagatggat gtgtcaatat tattcacgga cagcactctg ctgttaactt tatctgcgat       720
     aacccagata tcaaggctat ctcatttgtt ggaggagatg ctgctggaaa acacatctac       780
     gagcgtggag ccaagaacgg aaagcgcgtc caatccaaca tgggagccaa gaaccacgga       840
     gtcatcatgg ctgatgccaa caaagaacag accctcaatc agctcaccgc tgccgccttc       900
     ggagccgccg gacaacgctg catggctctc accaccgctg tgctcgtcgg agaagctcgc       960
     gcctggctcc cagaactcgt cgagaaggcc aagaacttga aggtcaacgc tggatggaag      1020
     ccggataccg acatcggacc actgatctcc aagcaatcca aggcccgtgt cctccgtctt      1080
     atcgagagtg ccaagaagga gggagctcag gttccacttg atggatccaa tatcactgtt      1140
     ccaggatttg agaatggaaa cttcgtggga ccaacgattc tcgctggagt caagccaaat      1200
     atgacttgct acagagaaga aatcttcggc ccagtccttg tcgtcatgga ggccgagaac      1260
     ttgaacgagg ccatcgaaat catcaacaac aacccatacg gaaacggaac ggccatcttc      1320
     accagcaacg gagccaccgc cagaaagttc accaacgaag tcgatgtcgg acaaatcgga      1380
     atcaacgtgc caatcccagt tccactccca atgttctcgt tcaccggctc gcgtggttca      1440
     ttcctcggag atctcaactt ctacggaaag gccggaatcc agttctacac tcaatggaag      1500
     actgtcactc aatactggaa cgagtcgctc accgagctga agccacaaat gtcgttccca      1560
     cagctcaagt aa                                                          1572
//
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