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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA88874; SV 1; linear; genomic DNA; STD; INV; 1377 BP.
XX
PA   Z49071.1
XX
DE   Caenorhabditis elegans C. elegans protein T22C8.2, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1377
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="II"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="T22C8"
FT   CDS             complement(join(Z49071.1:1838..2075,Z49071.1:2231..2451,
FT                   Z49071.1:2502..2618,Z49071.1:2686..2785,
FT                   Z49071.1:3272..3522,Z49071.1:3648..3788,
FT                   Z49071.1:3925..4040,Z49071.1:4092..4216,
FT                   Z49071.1:4366..4433))
FT                   /gene="chhy-1"
FT                   /locus_tag="T22C8.2"
FT                   /standard_name="T22C8.2"
FT                   /product="C. elegans protein T22C8.2, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans CHHY-1 protein; contains similarity to
FT                   Pfam domain PF01630 Hyaluronidase contains similarity to
FT                   Interpro domains IPR018155 (Hyaluronidase), IPR013785
FT                   (Aldolase-type TIM barrel), IPR001968 (Glycoside hydrolase,
FT                   family 56), IPR013032 (EGF-like region, conserved site),
FT                   IPR017430 (Glycoside hydrolase, family 56, Hyaluronidase),
FT                   IPR001329 (Glycoside hydrolase, family 56, allergen Api/Dol
FT                   m 2)"
FT                   /db_xref="GOA:Q22675"
FT                   /db_xref="HSSP:1FCQ"
FT                   /db_xref="InterPro:IPR013032"
FT                   /db_xref="UniProtKB/TrEMBL:Q22675"
FT                   /db_xref="WormBase:WBGene00011923"
FT                   /protein_id="CAA88874.1"
FT                   /translation="MVIVWYHQLLLVLLIFIGAAKGAQYIGSGASQPNRTDVVWMVPSW
FT                   TCKNEYSIDVEKYGILQNEDQHFVGGKQFAIFYEHSFGKIPYFKAQNESDPKNGGLPQM
FT                   GDLEAHLIQAEKDINETIPDENFNGIAVIDIEEFRPMWELSWGPFSVYKTESIRLTRQQ
FT                   HPYWSTKQIEWQAERDYEKACQKFFIETLRLGKRLRPNAKWGYYLFPKCNGDVGQKSDT
FT                   DCSTLFQKFNDNLHWLWGESTALFPSIYLYPSQKQNPEYNFVNSGALITETKRIKRNYC
FT                   PSCEIHVFTKIEYNPYYTPDDFYSKQNLASTLDLAIKMNANSVVIWSTSQSIGSRCGSL
FT                   QTYVDNTLGPYLQLTDRNLDKCRMERCEGRGECYLPRPKTNPAIYNFACRCERPYFGKS
FT                   CEYRGRRMGVSMPKASQTPQVIPDVTAYFSTSSNGTKKYNAPNQFYSRTGGDIKLARKL
FT                   "
XX
SQ   Sequence 1377 BP; 449 A; 264 C; 284 G; 380 T; 0 other; 2131857860 CRC32;
     atggtcattg tgtggtacca tcaactactg ctagtacttc tgatatttat aggagctgcc        60
     aaaggagctc agtacatagg ttcgggagcc tcccaaccca accgaacgga tgttgtgtgg       120
     atggttccct cttggacatg taaaaatgaa tattcaattg atgtagaaaa gtatggaatt       180
     ctgcaaaatg aggatcagca ttttgttggt ggaaaacagt ttgcaatttt ttatgagcac       240
     agttttggaa agattccata cttcaaggct cagaatgaaa gtgatccaaa gaacggaggg       300
     ctaccccaga tgggggatct cgaagctcac ttgattcagg ctgaaaagga tatcaatgaa       360
     actattccag atgagaattt caacggaatt gctgtcattg acattgagga gttcagacct       420
     atgtgggagc tcagttgggg tccattttcg gtctacaaaa ctgaatcaat tcgtctcacc       480
     cgtcagcaac atccctattg gtcaacaaaa caaattgaat ggcaagctga aagagattat       540
     gagaaagctt gtcaaaagtt ttttatcgag actcttcgac ttggaaaacg tcttcgacca       600
     aatgcaaaat ggggatatta tttgtttcca aaatgcaatg gagatgttgg acaaaagtcg       660
     gacactgatt gttctacatt atttcaaaag tttaacgata atctacactg gctatgggga       720
     gaaagtaccg ctctattccc atcaatttac ctgtatcctt ctcaaaagca aaacccggaa       780
     tataattttg tcaattcagg agctttaata acagaaacaa aacggataaa aagaaactat       840
     tgcccaagtt gtgagataca tgtttttaca aaaattgaat ataatccata ttatacacca       900
     gatgatttct attccaagca aaatcttgcc agcacattgg atcttgccat aaaaatgaac       960
     gcgaacagtg ttgtgatttg gagtacatct caatcgatcg gaagtcgttg tggatcactt      1020
     cagacttatg tagataacac attgggtccg tatcttcaat taacagaccg aaatttggac      1080
     aaatgtcgca tggagagatg tgaagggcgt ggggaatgct atttaccacg accgaaaaca      1140
     aatccagcta tctataactt tgcctgccgc tgtgaacgtc catatttcgg aaaaagctgt      1200
     gaataccgtg gccgtcgaat gggtgtatca atgccaaaag cttctcaaac tcctcaagtc      1260
     attccagatg tcactgccta cttctcaaca tcttccaatg gaactaaaaa atataatgct      1320
     ccaaatcagt tctattcaag aaccggcgga gacattaaat tagcaaggaa gttgtaa         1377
//
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