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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA87379; SV 1; linear; genomic DNA; STD; INV; 1617 BP.
XX
PA   Z47075.1
XX
DE   Caenorhabditis elegans C. elegans protein E02H1.4, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1617
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="II"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="E02H1"
FT   CDS             join(Z47075.1:4506..5061,Z47075.1:5106..5183,
FT                   Z47075.1:5275..5972,Z47075.1:6022..6146,
FT                   Z47075.1:6194..6353)
FT                   /gene="pme-2"
FT                   /locus_tag="E02H1.4"
FT                   /standard_name="E02H1.4"
FT                   /product="C. elegans protein E02H1.4, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans PME-2 protein; contains similarity to
FT                   Pfam domains PF02877 (Poly(ADP-ribose) polymerase,
FT                   regulatory domain) , PF05406 (WGR domain) , PF00644
FT                   (Poly(ADP-ribose) polymerase catalytic domain) contains
FT                   similarity to Interpro domains IPR004102 (Poly(ADP-ribose)
FT                   polymerase, regulatory region), IPR012317 (Poly(ADP-ribose)
FT                   polymerase, catalytic region), IPR008893 (WGR)"
FT                   /db_xref="GOA:Q09525"
FT                   /db_xref="InterPro:IPR004102"
FT                   /db_xref="InterPro:IPR008893"
FT                   /db_xref="InterPro:IPR012317"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q09525"
FT                   /db_xref="WormBase:WBGene00004050"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA87379.1"
FT                   /translation="MSIINDENGRGYKVHLCKTNIAQNNNKFYDMELLDEGGDFIVKLI
FT                   NGRIGYRGVTQLKDFDDLDRAKKFFESKFYEKTHLHWEERDDEPVPNKYAVVELATNAR
FT                   QTEKEVKKEEPEPEPKVDEKNTRGRKKRGIVKEKKEIKKEEEPVEEVNEKLKELMKCIC
FT                   DEDVHLGLLKQLKFNEAFGRPIDCLSLAQLTTGYEILSKIEESIGGKSARRSTRGRPRV
FT                   ADRVLAVKSDGPSLHDINKYYSLIPHSFGFCVPPKIDSHAKIQAERELLDALKGSIEAS
FT                   LELKDLKKTASSKDIYQRLYERLPCHLEPVSEEIAGKIGDCLAMRGPTHCYKLSLIDAF
FT                   ELKDPNEIPTEAPVEVQEVPKKRGRKSTKTAAPTVPPPTTKRLLWHGTRVTNVFSILMN
FT                   GLQFPVGDRCGLMFGNGVYFANVPTKSANYCCPEASKRVFMLLCEVETANPLVLYESEI
FT                   DADEKMEKAKKTSVYAAGKHTPRDTVEINGIPAFKSNLETIEEETRLLYDEYVMFNKEH
FT                   FKIKYVVEVKVDRLTAKEMMA"
XX
SQ   Sequence 1617 BP; 546 A; 303 C; 364 G; 404 T; 0 other; 1858788509 CRC32;
     atgtctataa tcaacgacga aaatggaaga ggctataaag tacatctttg caagacgaat        60
     attgcacaga acaacaataa attttacgat atggaattgt tggatgaggg aggtgatttc       120
     attgtgaagc ttatcaatgg acgtattgga tatcgtggtg tcacacaatt aaaagatttc       180
     gatgacctcg acagagccaa gaagttcttc gaaagcaaat tctacgagaa aactcatctt       240
     cattgggaag aaagagacga tgaaccggtt cccaataaat atgcagtcgt tgagttggct       300
     actaacgcaa gacagactga aaaagaagtt aaaaaggagg aaccggaacc tgagccgaaa       360
     gttgatgaga aaaatacacg tggaaggaag aaaagaggaa ttgttaaaga aaagaaagaa       420
     atcaagaaag aagaggaacc agttgaagaa gttaatgaaa agctgaagga attgatgaaa       480
     tgcatctgcg acgaagatgt tcatctggga ctcttgaaac aactgaaatt taacgaagct       540
     tttggaagac caattgattg cctctcactt gcccaactca ccactggata tgaaattttg       600
     agtaagattg aggaatcgat tggaggaaaa tcagctcgaa gatctactcg tggccggcca       660
     cgagtagctg accgtgttct tgctgttaaa tccgatggtc catctcttca cgacatcaac       720
     aaatattatt ctctcatccc tcattcattt ggtttctgtg ttcctccaaa aattgattct       780
     catgctaaaa ttcaagctga acgagagctt ctggatgcac tgaaaggatc aattgaagca       840
     tcactggaac tgaaggattt gaaaaagaca gcatcgtcga aggatattta tcaaagactt       900
     tatgagcgcc tcccgtgcca tttggagcca gtttcggaag aaattgcagg aaaaattgga       960
     gactgcttgg ctatgcgtgg acccactcat tgttacaagc tttcactcat tgatgcattc      1020
     gagttaaagg atccaaatga aattccaact gaagctccag ttgaagttca ggaagttccg      1080
     aagaagagag gacgaaagag cacaaagacc gctgctccaa ctgttccacc accaactaca      1140
     aaacgccttc tttggcacgg tactcgtgtg acaaatgtct tctcaatcct catgaatgga      1200
     cttcagttcc cagttggaga tcgctgtggt ctgatgttcg gaaatggagt ttatttcgca      1260
     aatgttccaa ctaaatccgc gaattactgt tgcccagagg cttcaaagag agttttcatg      1320
     cttctttgcg aggttgaaac tgcgaaccca ttagttctct acgagtcaga aattgacgcg      1380
     gatgagaaaa tggaaaaagc gaaaaagacg tcggtttatg cagctggaaa gcacactcca      1440
     agagacactg ttgaaatcaa tggaatcccg gcattcaagt caaatcttga gacaatcgaa      1500
     gaagaaactc gtcttctcta cgatgaatat gtgatgttca acaaggaaca cttcaaaata      1560
     aaatatgttg tcgaagtgaa agtggatcgt cttaccgcta aggaaatgat ggcttaa         1617
//
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