EBI Dbfetch

ID   CAA86745; SV 1; linear; genomic DNA; STD; INV; 708 BP.
XX
PA   Z46787.1
XX
DE   Caenorhabditis elegans C. elegans protein C16C10.7, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..708
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="III"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="C16C10"
FT   CDS             complement(join(Z46787.1:21889..22010,
FT                   Z46787.1:22436..22706,Z46787.1:23264..23510,
FT                   Z46787.1:24112..24179))
FT                   /gene="rnf-5"
FT                   /locus_tag="C16C10.7"
FT                   /standard_name="C16C10.7"
FT                   /product="C. elegans protein C16C10.7, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans RNF-5 protein; contains similarity to
FT                   Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger)
FT                   contains similarity to Interpro domains IPR001841 (Zinc
FT                   finger, RING-type), IPR017907 (Zinc finger, RING-type,
FT                   conserved site), IPR018957 (Zinc finger, C3HC4 RING-type)"
FT                   /db_xref="GOA:Q09463"
FT                   /db_xref="InterPro:IPR001841"
FT                   /db_xref="InterPro:IPR017907"
FT                   /db_xref="InterPro:IPR018957"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q09463"
FT                   /db_xref="WormBase:WBGene00004381"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA86745.1"
FT                   /translation="MASETKAPSEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLF
FT                   CWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKKVPPRPKGQRSEPP
FT                   PQSFAGFNWGGDGGMMGGGGPNVHFSFGIGTVNGLFPLMFMLPFIQGIFPLSFVASFFG
FT                   NGNQGAAAAGGGNGGGNDGNDGTHAHTHGHTHGPRGHGESAAPGSRMAQEEEYLSNIFK
FT                   YIGFFMLFWLLFV"
XX
SQ   Sequence 708 BP; 194 A; 135 C; 181 G; 198 T; 0 other; 1492319136 CRC32;
     atggcgtcgg agacgaaagc tccatccgag gagcccacga gctccagtaa taaagatgaa        60
     tctgcgagat ttgaatgtaa tatttgtttg gacgcagcaa aagatgcagt cgtttcccta       120
     tgtggacatc ttttttgttg gccatgtctg agtcaatggc ttgatactcg tccaaataat       180
     caagtttgtc cagtgtgtaa aagtgcaatt gatgggaata aagttgtacc gatctatgga       240
     agaggtggcg attcatcgga tccacgtaaa aaagttccac cacgtccaaa aggacaacga       300
     agtgaaccac caccgcaatc atttgccggt ttcaattggg gtggcgatgg cggaatgatg       360
     ggcggcggcg gaccaaatgt gcatttttca tttggaattg gtacggtgaa tggtctgttc       420
     ccgttgatgt tcatgctacc tttcattcaa ggcatcttcc cattgtcatt tgttgcttca       480
     ttctttggaa atggtaatca aggagcagca gcagctggtg gtggaaatgg tggaggaaat       540
     gacggaaatg atggtacaca tgcacatact catggacata cacatggacc ccgtggacac       600
     ggagaatcag ctgcaccggg atcaagaatg gctcaagaag aggaatattt gtcgaatatt       660
     ttcaaatata ttggattttt tatgcttttc tggcttctat tcgtctaa                    708
//