EBI Dbfetch

ID   CAA82376; SV 1; linear; genomic DNA; STD; INV; 1980 BP.
XX
PA   Z29117.1
XX
DE   Caenorhabditis elegans C. elegans protein C48B4.1, partially confirmed by
DE   transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1980
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="III"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="C48B4"
FT   CDS             complement(join(Z29117.1:29677..29802,
FT                   Z29117.1:29854..30135,Z29117.1:30587..30729,
FT                   Z29117.1:31073..31231,Z29117.1:31669..32378,
FT                   Z29117.1:32685..32778,Z29117.1:33512..33581,
FT                   Z29117.1:33691..33855,Z29117.1:34311..34476,
FT                   Z29117.1:35083..35147))
FT                   /locus_tag="C48B4.1"
FT                   /standard_name="C48B4.1"
FT                   /product="C. elegans protein C48B4.1, partially confirmed
FT                   by transcript evidence"
FT                   /note="contains similarity to Pfam domains PF01756
FT                   (Acyl-CoA oxidase) , PF02770 (Acyl-CoA dehydrogenase,
FT                   middle domain) contains similarity to Interpro domains
FT                   IPR013786 (Acyl-CoA dehydrogenase/oxidase, N-terminal),
FT                   IPR006091 (Acyl-CoA oxidase/dehydrogenase, central region),
FT                   IPR013764 (Acyl-CoA oxidase/dehydrogenase, type1/2,
FT                   C-terminal), IPR012258 (Acyl-CoA oxidase), IPR002655
FT                   (Acyl-CoA oxidase, C-terminal)"
FT                   /db_xref="GOA:P34355"
FT                   /db_xref="InterPro:IPR002655"
FT                   /db_xref="InterPro:IPR006091"
FT                   /db_xref="InterPro:IPR009075"
FT                   /db_xref="InterPro:IPR009100"
FT                   /db_xref="InterPro:IPR012258"
FT                   /db_xref="InterPro:IPR013764"
FT                   /db_xref="InterPro:IPR013786"
FT                   /db_xref="UniProtKB/Swiss-Prot:P34355"
FT                   /db_xref="WormBase:WBGene00008167"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA82376.1"
FT                   /translation="MPLNKLIQDGDNQDLTDERFKATFDTDALAAVFHGGEDALKRIRE
FT                   LRDEVTKRWHLFDALPGAHRTRAERMEDVSRKLKNLMESVGEFADFTNNLDMLVIIRDV
FT                   MGIEGFPLALHNLMFVPTIQNQADDEQTEWWLMDALQGKIIGTYAQTELGHGTNLGAIE
FT                   TTATYDKLTEEFIIHTPTTTATKWWPGGLGTSCTHVVLVANLIIDTKNYGLHPFFVPIR
FT                   DRNSYSVMSGVRVGDIGTKMGVNCVDNGFLAFDNYRIPRRNMLMKHSKVSKEGLYTAPS
FT                   HPKVGYTTMLYMRSEMIYHQAYYLAMAMAISIRYSAVRRQGEIKPGTQEVQILDYQTQQ
FT                   YRIFPGLARCFAFNTAAATVRQMTENCIKQLSHGNSDVLADLHALSCGLKAVVTHQASQ
FT                   SIDQARQACGGHGYSDASYLPTLYTCSVGACTYEGENMVMLLQLSKYLMKAAAKAEKGE
FT                   EMAPLVAYLVKPDITETNDKFAKMLSHFEHIARHRVMHAYRQMIEEEKQGIERDYAFAN
FT                   HSVDWTKAARAHTKLFIARGFVKSVQEVSDEAVHDVLTTLAELYLSYELIEMSADLTAN
FT                   GYLSESDVQQIRHQIYDSMRKTRRNAVSIVDSFDICDRELRSVLGRRDGHVYENLYKWA
FT                   QMSPLNERNLPHVEKYLKPMTSKL"
XX
SQ   Sequence 1980 BP; 605 A; 388 C; 439 G; 548 T; 0 other; 64248111 CRC32;
     atgccgctga ataagttgat tcaagatgga gacaatcaag atttgactga tgaaagattt        60
     aaagcaacat tcgatactga tgctcttgcc gccgtgttcc atggaggaga agatgcactg       120
     aaaagaattc gagaattgag agatgaagta accaagcggt ggcatttatt tgatgctctt       180
     ccaggtgctc ataggacaag agccgagaga atggaggatg tcagcaggaa gctgaaaaac       240
     ctcatggaat ctgtgggcga gtttgctgat ttcaccaata atctcgatat gttggttatc       300
     attcgagatg taatgggcat tgaaggattt ccattggctc ttcataactt gatgtttgtg       360
     ccaactattc aaaatcaagc cgacgatgag caaactgagt ggtggctgat ggatgcactt       420
     cagggcaaga tcattggaac ttatgcccaa acggaactcg gacacggaac caatctcgga       480
     gccatcgaaa ctacagccac ttacgataag ctaacggaag aatttatcat tcatacgcca       540
     actacaacgg ccacaaaatg gtggcctgga ggtcttggaa ccagttgtac acatgtcgtc       600
     cttgttgcaa acttgattat tgacaccaaa aactatgggc ttcatccatt cttcgtccca       660
     attcgtgacc gtaattccta ttctgtaatg tctggagtac gtgttggaga tattggaact       720
     aaaatgggag tgaactgtgt cgataacgga tttttggcct ttgacaacta ccgtattcca       780
     agacgcaata tgcttatgaa gcacagtaaa gtatcaaaag aagggctcta cacggctcca       840
     tctcatccaa aagtcggata tactacaatg ttatatatga gatctgaaat gatttatcat       900
     caagcatatt atcttgcaat ggcaatggct atttcaattc gatattcagc tgttcgtaga       960
     caaggagaga ttaagccagg aacacaagaa gttcaaattc tcgattatca aactcaacag      1020
     tatcgtattt tcccgggact tgctcgttgt tttgctttta acacggcagc tgcaactgtt      1080
     cgtcaaatga ctgaaaactg tattaaacaa ctttcacatg gaaactctga tgttcttgct      1140
     gatttgcatg ctctttcctg tggactcaag gcagttgtaa ctcatcaagc atctcaatca      1200
     attgatcaag caagacaagc atgtggtgga catggatatt cggatgccag ttatttaccg      1260
     actttgtata cttgctcggt tggtgcatgc acatatgaag gagaaaacat ggtaatgcta      1320
     ctgcagctgt ccaagtacct aatgaaagcg gcggcaaaag ccgaaaaggg agaagaaatg      1380
     gcaccattgg ttgcatatct tgtaaaaccg gacattaccg agactaatga taagttcgca      1440
     aagatgctca gccacttcga gcacattgca cgtcatcgtg taatgcatgc ttatcgtcaa      1500
     atgattgaag aagagaaaca gggaatcgag agagattatg cttttgcaaa tcattcagtt      1560
     gactggacta aggctgctcg tgctcataca aagttgttta tcgcccgtgg tttcgtgaaa      1620
     agtgtgcagg aagttagtga tgaagcagtt catgatgtac ttacaacact tgctgaactc      1680
     tatctctctt atgaacttat tgaaatgtcg gctgatttga cagctaatgg atatctttcc      1740
     gaatcggatg tccaacaaat tcgacatcaa atctacgatt caatgagaaa aactcgccgc      1800
     aatgctgttt caattgtcga ctcatttgat atttgtgatc gagagcttcg ttcagtactc      1860
     ggtcgccgtg atggacatgt atatgagaat ctgtacaaat gggctcaaat gagcccactc      1920
     aatgagagaa atcttcctca tgttgaaaag tatttgaagc caatgacaag caaactttaa      1980
//