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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA79536; SV 1; linear; genomic DNA; STD; INV; 1596 BP.
XX
PA   Z19152.1
XX
DE   Caenorhabditis elegans C. elegans protein B0464.1, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1596
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="III"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="B0464"
FT   CDS             complement(join(Z19152.1:32981..33446,
FT                   Z19152.1:33492..33628,Z19152.1:33674..34417,
FT                   Z19152.1:34464..34616,Z19152.1:34774..34869))
FT                   /gene="drs-1"
FT                   /locus_tag="B0464.1"
FT                   /standard_name="B0464.1"
FT                   /product="C. elegans protein B0464.1, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans DRS-1 protein; contains similarity to
FT                   Pfam domains PF01336 (OB-fold nucleic acid binding domain)
FT                   , PF00152 (tRNA synthetases class II (D, K and N)) contains
FT                   similarity to Interpro domains IPR004523 (Aspartyl-tRNA
FT                   synthetase, class IIb, archea/euk type), IPR012340 (Nucleic
FT                   acid-binding, OB-fold), IPR004365 (Nucleic acid binding,
FT                   OB-fold, tRNA/helicase-type), IPR002312 (Aspartyl-tRNA
FT                   synthetase, class IIb), IPR004364 (Aminoacyl-tRNA
FT                   synthetase, class II (D, K and N)), IPR018150
FT                   (Aminoacyl-tRNA synthetase, class II (D/K/N)-like)"
FT                   /db_xref="GOA:Q03577"
FT                   /db_xref="HSSP:1N9W"
FT                   /db_xref="InterPro:IPR004365"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q03577"
FT                   /db_xref="WormBase:WBGene00001094"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA79536.1"
FT                   /translation="MADAAEGEQPKLSKKELNKLARKAKKDEKAGEKGGNQQQAAAMDQ
FT                   EDASKDFYGSYGLVNSKEKKVLNFLKVKEINVSNATKDVWVRGRIHTTRSKGKNCFLVL
FT                   RQGVYTVQVAMFMNEKISKQMLKFVSSISKESIVDVYATINKVDNPIESCTQKDVELLA
FT                   QQVFVVSTSAPKLPLQIEDASRRAPTDEEKASEQENQLAVVNLDTRLDNRVIDLRTPTS
FT                   HAIFRIQAGICNQFRNILDVRGFVEIMAPKIISAPSEGGANVFEVSYFKGSAYLAQSPQ
FT                   LYKQMAIAGDFEKVYTIGPVFRAEDSNTHRHMTEFVGLDLEMAFNFHYHEVMETIAEVL
FT                   TQMFKGLQQNYQDEIAAVGNQYPAEPFQFCEPPLILKYPDAITLLRENGIEIGDEDDLS
FT                   TPVEKFLGKLVKEKYSTDFYVLDKFPLSVRPFYTMPDAHDERYSNSYDMFMRGEEILSG
FT                   AQRIHDADMLVERAKHHQVDLAKIQSYIDSFKYGCPPHAGGGIGLERVTMLFLGLHNIR
FT                   LASLFPRDPKRLTP"
XX
SQ   Sequence 1596 BP; 476 A; 368 C; 345 G; 407 T; 0 other; 687273614 CRC32;
     atggctgatg ctgccgaagg tgaacaacca aaactctcca agaaggagct caataagctt        60
     gctagaaaag ctaagaaaga tgagaaagct ggagagaaag gaggaaacca acaacaggct       120
     gccgctatgg accaagaaga cgcatccaaa gacttttatg gatcatatgg gcttgttaac       180
     tctaaggaaa agaaggtgtt gaactttctg aaagtcaagg agatcaacgt ttccaacgca       240
     acaaaagacg tttgggtccg tgggcgcatt cacactactc gatcgaaggg aaagaattgc       300
     ttcctcgttc tccgtcaggg agtctacacc gttcaagtag caatgtttat gaacgaaaag       360
     attagcaagc aaatgttgaa gtttgtttct tctatctcaa aggagtctat tgttgacgtt       420
     tatgctacta tcaacaaggt tgacaatcca attgaatctt gcacacaaaa ggatgtcgaa       480
     ctacttgctc aacaagtatt tgtcgtttca acttctgctc caaagcttcc gctccaaatt       540
     gaggatgcat cacgcagagc accaactgac gaagagaaag ccagcgagca ggagaatcaa       600
     ttggctgttg ttaatctcga tacaagactt gacaaccgtg tcatcgatct tcgtacgcca       660
     acctctcatg ctatcttcag aattcaagcc ggaatttgta atcagttcag aaacattctc       720
     gatgttagag gattcgtgga gatcatggct ccaaaaatta tctctgcgcc aagtgagggt       780
     ggagccaatg ttttcgaagt ttcctatttc aaaggatccg cctacttggc tcaatctcca       840
     caactctata agcaaatggc tattgccgga gattttgaaa aggtctacac tattggtcca       900
     gtattccgtg ctgaagattc taacacccat cgtcatatga ccgagttcgt tggacttgac       960
     ttggaaatgg ccttcaactt ccattatcac gaggttatgg aaaccattgc agaagtgctc      1020
     acccagatgt tcaaaggtct tcaacaaaac tatcaagatg agatcgcagc cgttggaaat      1080
     caatatccag ctgagccatt ccagttctgc gagccaccac ttattttaaa atatcctgat      1140
     gcaatcactc ttctccgtga gaatggaatt gaaatcggag acgaagatga tctgtcgaca      1200
     ccagtggaga agttcctcgg aaaattggtg aaggagaagt atagcaccga cttctacgtg      1260
     ctcgacaagt tcccactgtc tgttcgtcca ttctacacca tgccagacgc tcacgatgaa      1320
     cgttattcaa acagttacga catgtttatg cgtggagaag agattctctc aggagctcaa      1380
     cgtattcacg atgctgatat gcttgtcgaa cgtgcgaaac atcaccaagt tgatctggct      1440
     aagattcagt cttacatcga ttccttcaaa tacggatgtc caccacacgc aggaggaggc      1500
     atcggacttg agcgagttac catgctcttc cttggactcc acaacatccg tctggcatcc      1560
     ctcttcccac gtgacccaaa acggttgact ccataa                                1596
//
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