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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA78976; SV 1; linear; mRNA; STD; PLN; 1305 BP.
XX
PA   Z17328.1
XX
DE   Lilium longiflorum (trumpet lily) pectate lyase
XX
OS   Lilium longiflorum (trumpet lily)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Liliales; Liliaceae; Lilium.
OX   NCBI_TaxID=4690;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1305
FT                   /organism="Lilium longiflorum"
FT                   /cultivar="Nellie White"
FT                   /mol_type="mRNA"
FT                   /dev_stage="mature flower"
FT                   /tissue_type="pollen"
FT   CDS             Z17328.1:70..1374
FT                   /product="pectate lyase"
FT                   /note="putative product"
FT                   /db_xref="GOA:P40973"
FT                   /db_xref="HSSP:1JRG"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/Swiss-Prot:P40973"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA78976.1"
FT                   /translation="MKAAQFFLYSLLFFASAALSSANIAEFDEYWQKKSKVAQAKAKKA
FT                   YTPHPEEVTNHFNKAVHSSFEGNSTRRNLRTNKLGQCLATNPIDRCWRCKKNWSANRKD
FT                   LVKCVKGFGRKTTGGAAGEIYVVTDPSDDSLTDPKFGTLRWGVIQDRPLWIIFGKSMVI
FT                   RLKQELIINNDKTIDGRGANVQIAGGAQLTVQFVHNVIIHGIHIHDIKPGEGGLIRDSE
FT                   KHSGIRTRSDGDGISIIGSSNIWIDHVSLARCSDGLIDVILGSTAITISNCHLTEHDDV
FT                   MLLGASDTYTQDEIMQVTVAFNHFGRGLVQRMPRCRYGFVHVVNNDYTHWIMYAVGGSQ
FT                   HPTIISQGNRYIAPHIEAAKEVTKRDYAEPAEWSKWTWKSQGDLFVSGAFFVESGGPFE
FT                   NKYSKKDLIKAKPGTFVQRLTRFSGALNCKENMEC"
XX
SQ   Sequence 1305 BP; 347 A; 341 C; 332 G; 285 T; 0 other; 585543410 CRC32;
     atgaaagccg ctcagttctt cctctactct ctcctcttct ttgcttcagc ggccttatca        60
     agcgcgaaca tcgccgagtt cgacgagtac tggcagaaga aatccaaggt cgcacaggcc       120
     aaggccaaga aggcatatac acctcaccca gaggaggtga ccaaccactt caacaaggct       180
     gtccacagtt ctttcgaggg taacagcacc agaagaaacc tgcgaaccaa taagctgggt       240
     cagtgcttag ccactaaccc tatcgaccgc tgctggcggt gcaagaagaa ctggtctgcc       300
     aatcgcaagg acctcgttaa gtgtgtcaag ggctttgggc ggaaaaccac cggtggtgcc       360
     gcaggtgaaa tctacgttgt taccgaccca tctgacgaca gtctaacgga cccaaagttt       420
     ggtactctcc gatggggtgt tatccaagac cggcctctct ggatcatttt tggcaagagc       480
     atggtcatcc gtctcaaaca ggagctcatc atcaacaatg acaagaccat cgatggtcgt       540
     ggcgccaatg tccaaattgc cggtggagcc caactcaccg tccaattcgt gcacaatgtc       600
     atcatccacg gtatccacat ccacgatatc aagcccgggg aggggggtct catccgtgac       660
     tccgagaaac atagtgggat aaggaccagg agcgatggcg acggtatctc gattattgga       720
     tcatcaaata tctggatcga ccatgtctcg ttggcccgat gctctgatgg actcattgat       780
     gtcatcttag gctccactgc catcacgatt tcaaattgcc acttaaccga gcatgacgat       840
     gttatgcttc tgggcgctag cgatacctac acacaagatg agatcatgca agttacggtg       900
     gccttcaacc acttcggaag aggtctcgtg cagaggatgc caaggtgccg ttatggattt       960
     gtgcatgtcg tgaacaacga ctacactcac tggattatgt atgcggtagg aggaagccag      1020
     cacccaacaa tcatcagcca aggcaatcgc tacatcgctc cccatatcga agcagctaaa      1080
     gaggtgacca agagggatta tgcggagcca gcagagtgga gcaaatggac ttggaagtcc      1140
     cagggtgact tgtttgtcag tggagccttc tttgtagaat ctggaggtcc ctttgagaac      1200
     aagtactcta agaaggactt aatcaaagcc aagccgggaa cattcgtgca gaggctcaca      1260
     cgcttctcgg gcgccctcaa ctgcaaggaa aatatggaat gctga                      1305
//
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