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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA77473; SV 1; linear; genomic DNA; STD; INV; 594 BP.
XX
PA   Z11126.1
XX
DE   Caenorhabditis elegans C. elegans protein ZK643.2, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..594
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="III"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="ZK643"
FT   CDS             join(Z11126.1:31916..32293,Z11126.1:32702..32917)
FT                   /locus_tag="ZK643.2"
FT                   /standard_name="ZK643.2"
FT                   /product="C. elegans protein ZK643.2, confirmed by
FT                   transcript evidence"
FT                   /note="contains similarity to Pfam domain PF00383 Cytidine
FT                   and deoxycytidylate deaminase zinc-binding region contains
FT                   similarity to Interpro domains IPR016192 (APOBEC/CMP
FT                   deaminase, zinc-binding), IPR002125 (CMP/dCMP deaminase,
FT                   zinc-binding), IPR016473 (dCMP deaminase), IPR015517
FT                   (Cytidine deaminase)"
FT                   /db_xref="GOA:P30648"
FT                   /db_xref="InterPro:IPR002125"
FT                   /db_xref="InterPro:IPR015517"
FT                   /db_xref="InterPro:IPR016192"
FT                   /db_xref="InterPro:IPR016193"
FT                   /db_xref="InterPro:IPR016473"
FT                   /db_xref="UniProtKB/Swiss-Prot:P30648"
FT                   /db_xref="WormBase:WBGene00014034"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA77473.1"
FT                   /translation="MVPPITSDEFCETSGCFGDSANLHTTLERLKININSDAKKLVDTN
FT                   GDLKKHQRFLRIAKVTSLRSKDPNTQVGCVIVDKDNCIVSVGYNGFPIGVDDDVFRWDK
FT                   EDPEDNKHLYVVHAEMNAIINKRCTTLHDCTVYVTLFPCNKCAQMLIQSRVKKVYFLEN
FT                   RDELAFRASKKMLDHARLPYEQIVMPQEAYVIEL"
XX
SQ   Sequence 594 BP; 192 A; 114 C; 122 G; 166 T; 0 other; 16765499 CRC32;
     atggtgccac ccattacatc tgatgaattt tgtgaaactt ccggctgctt tggcgattct        60
     gcaaatcttc acacaaccct ggaacggctc aaaatcaata taaattctga tgccaaaaag       120
     ctagtcgata caaatggtga tttaaagaaa catcaacgat tccttcgaat agcaaaagtg       180
     acgtcactcc ggagtaagga tccaaacaca caagttgggt gtgttattgt ggataaagac       240
     aattgcattg tgtcggttgg atacaatgga tttccgattg gggtcgatga tgacgttttt       300
     cgatgggata aagaagatcc agaagacaat aaacatcttt atgttgttca tgccgagatg       360
     aatgccataa taaataaacg atgcactact cttcacgatt gtacagtcta cgtcactttg       420
     ttcccttgca ataaatgcgc tcaaatgttg atccagtccc gagtcaaaaa agtctacttc       480
     ctagaaaatc gtgatgaatt ggcatttcga gcttcaaaaa agatgctcga tcatgcgagg       540
     ttgccatacg aacaaattgt gatgccacaa gaagcttatg tgattgaatt ataa             594
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