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EBI DbfetchID CAA62412; SV 1; linear; genomic RNA; STD; VRL; 2685 BP. XX PA X90904.1 XX DE Barley mild mosaic virus RNA2 polyprotein XX OS Barley mild mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae; OC Bymovirus. OX NCBI_TaxID=12466; XX FH Key Location/Qualifiers FH FT source 1..2685 FT /organism="Barley mild mosaic virus" FT /host="barley" FT /strain="UK-F" FT /mol_type="genomic RNA" FT /clone="pC6" FT CDS X90904.1:143..2827 FT /gene="RNA2" FT /product="RNA2 polyprotein" FT /db_xref="GOA:Q65657" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/Swiss-Prot:Q65657" FT /func_characterised="identical sequence" FT /protein_id="CAA62412.1" FT /translation="MMMNSTIRQGWQQVLRRFSIPASGDRLIVSNSTDQPIGLFGAFDT FT SLQTLSQVTNDPEILKQKSNIPTHLDIASVLETSPRSFPWVFLTNSFCTFGGSIHAQNL FT QAFATAEFKSGFCYMNLLIPLSFDIIDAHADSFRGFVEQLPDTLGAYPSLSMVLNVMLH FT AATRFPEIVASPVPTIAFDAESLQFHVTDKRGVPGMWNILKACRVYELLSLAADGIGCE FT YMLYPVGAAPQYSFWKKSMDHFISDRFVEFLAMQGLLASALEQDYKTHDARDALLTALQ FT NAGYTNVVARERRFPNGHDPSTVWLNLNEAPISEKLTELKRYLLVGHRSDEIADITHNV FT HQHVFEVLKTMSVQFSKTTNAYNRARFEVNHEVIWNAEYGRSSQQNAELEALVLFLNRQ FT SLEIENILRRTTSPVVVTNWQPDVPPAAPEISEGEPTHAVATPITEAPTHATPVEVVNL FT PPTRSYWAETLVGVLTAILGTIFALLTRALIRPKRLRRKSTFPWVSLDSGDEDDDHSGG FT GGGSPQTPGGQPPASPAPGTHQSRFSVQDIASDTSLLSVDLDEDTLSQYDETFQTIRRA FT LFENSFGDILQNSARWISTLEAMALADGNAPYTLLAQYLNGIEEAYTNFRNTGHISRAT FT LSGFFVLEDSLRAAGIAFGGTTPTQTIQNQSADSPARRWKTRFEQIACELGDASIKSLA FT DLADIIDTERERGDLTQFDVLAASSISSLCRAVRIISDTTDPNTQLALVENATAMQNNI FT NAILGTNVSIPFLSATRRLLITRRIQEAGAESRSGATPDTIQQLADAELAEIVSEANMF FT NEMAASQRDIANATREATIREHVLSPVNALANVGMAAAFFRSGGLRSRAFHPTMPTMPG FT SPAAIGRPMFQAFRGRGHRLNRR" XX SQ Sequence 2685 BP; 677 A; 763 C; 622 G; 623 T; 0 other; 3859711818 CRC32; atgatgatga actctacgat tcgccaagga tggcagcaag tgctcaggcg cttttccatc 60 ccagcatccg gagatagact catcgtctcc aattccactg atcagcccat aggtcttttc 120 ggagcatttg atacatcact ccaaacactc tcacaagtca ccaatgaccc tgagattttg 180 aagcagaagt ccaacatccc cacgcatcta gacatagcat ctgtgctcga aaccagccct 240 cgatcttttc catgggtttt cctcacaaac tccttctgca ctttcggtgg ctccatacac 300 gctcagaacc ttcaagcctt tgcaaccgcc gagttcaaga gtggattttg ttacatgaac 360 ctgctgatac cgcttagctt cgacatcatc gatgcacacg ccgattcctt ccgcggtttt 420 gtcgaacaac tccctgatac gctaggtgcc tatccttcgc tcagcatggt actaaacgtc 480 atgctgcacg cagctacgcg cttcccagag attgttgctt cccccgttcc aactatagca 540 ttcgatgctg aatcactgca atttcatgta actgataaac ggggcgtccc tggcatgtgg 600 aacatactta aggcctgccg cgtgtatgag ctcctctcgc ttgctgcgga tggcataggc 660 tgcgagtaca tgctgtatcc cgttggcgct gcgccccaat actccttctg gaagaaatcc 720 atggaccact tcatatctga ccggtttgtg gaattcttag ccatgcaggg tttgcttgct 780 agtgcacttg agcaggatta caaaacacac gacgcacgcg atgcattact cacagctcta 840 cagaacgcag gttacacgaa tgttgtcgca agagaacgga gatttccaaa cggccatgac 900 ccaagcaccg tctggttgaa cctgaacgag gctcccattt cagagaagct aactgagctc 960 aaacgatacc tcctggttgg tcacagaagc gatgagattg cggacatcac acacaacgtt 1020 caccagcacg tcttcgaggt tcttaaaacc atgtctgtcc agtttagcaa gacaaccaac 1080 gcttacaacc gcgcccgttt tgaggttaac catgaggtga tatggaatgc agagtacgga 1140 cgcagttctc aacaaaacgc tgagctcgaa gcccttgttc tatttctcaa tagacagtcg 1200 ctagagatcg aaaacattct gcgcagaaca actagtcccg ttgttgtgac gaactggcag 1260 cctgatgttc ctcccgcagc acctgaaatc agcgaagggg agccaacgca tgcagtcgca 1320 acaccaataa ctgaggcacc aacacatgca actcctgttg aagttgtgaa tttgccacca 1380 acacgctctt attgggccga aacactcgtt ggtgtgttaa ccgcaatttt gggaaccatc 1440 ttcgccttgc tcactcgggc gctcattcgc ccaaagaggc tgcggagaaa atccaccttt 1500 ccctgggtgt cactagactc tggagacgaa gatgatgacc attctggtgg aggaggaggt 1560 agcccacaaa cacccggcgg gcagccccca gcctcgccag cacccggaac tcaccagtcg 1620 cgcttttccg tgcaagatat agcatcggac acgagcctac tgagtgtgga ccttgatgaa 1680 gacacactct cccagtacga cgaaactttc cagacaattc gtcgtgcgct cttcgagaac 1740 agttttggag acatcctgca aaactcagct cgctggatct ccacactgga ggcgatggct 1800 cttgcagatg gcaatgcccc ttacacgctc cttgcgcagt accttaacgg aatcgaggag 1860 gcatacacaa actttcgcaa cacagggcat atctcccgtg caacattgtc aggcttcttc 1920 gttctggagg atagtctgcg tgcggctggc atagcttttg ggggcacaac gcccacgcaa 1980 actatacaaa accagtctgc tgactcccca gcccgtcgat ggaaaacacg ctttgagcag 2040 atcgcatgcg aactaggtga tgctagcatc aagtcgcttg cagatcttgc agacatcatc 2100 gacactgagc gtgagagagg agacttaact cagtttgatg ttctcgcagc ttcctccata 2160 agcagtctct gccgcgctgt ccgtattatc agtgacacaa ctgatccaaa cacacaacta 2220 gctcttgtcg agaacgcaac tgctatgcaa aacaacataa acgccatcct aggcacgaat 2280 gttagcatcc ctttcctcag cgcaacgcgt cgcctgctca taacacgtcg cattcaagaa 2340 gctggagcgg agagccgctc tggcgcaacg ccagacacca tacagcagct cgccgatgct 2400 gagctagcgg aaattgtcag cgaggcaaac atgttcaatg agatggctgc tagtcagaga 2460 gatattgcca atgcaacacg cgaagctacc attcgtgagc atgtacttag tcctgttaat 2520 gccttggcca atgttggcat ggcggctgct ttcttccgat ctggtggttt gcgttcgagg 2580 gcttttcatc ccacaatgcc aacaatgcct ggtagtcctg ccgccatagg gcggccaatg 2640 tttcaagcct ttagaggacg agggcaccgt ctcaatagac gttaa 2685 // |
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