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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA55546; SV 1; linear; mRNA; STD; ROD; 1605 BP.
XX
PA   X78949.1
XX
DE   Rattus norvegicus (Norway rat) gamma-butyrobetaine,2-oxoglutarate
DE   dioxygenase
XX
OS   Rattus norvegicus (Norway rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Rattus.
OX   NCBI_TaxID=10116;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1605
FT                   /organism="Rattus norvegicus"
FT                   /mol_type="mRNA"
FT                   /cell_line="neonatal skin"
FT   CDS             X78949.1:70..1674
FT                   /gene="P4Halpha"
FT                   /product="gamma-butyrobetaine,2-oxoglutarate dioxygenase"
FT                   /product="prolyl 4-hydroxylase, alpha subunit"
FT                   /EC_number="1.14.11.1"
FT                   /db_xref="GOA:P54001"
FT                   /db_xref="InterPro:IPR019734"
FT                   /db_xref="UniProtKB/Swiss-Prot:P54001"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAA55546.1"
FT                   /translation="MIWGVLMMGILLPQCSAHPGFFTSIGQMTDLIHNEKDLVTSLKDY
FT                   IKAEEDKLEQIKKWAEKLDRLTSTATKDPEGFVGHPVNAFKLMKRLNTEWSELENLILK
FT                   DMSDGFISNLTIQRQYFPNDEDQVGAAKALFRLQDTYNLDTNTISKGNLPGVKHKSFLT
FT                   AEDCFELGKVAYTEADYYHTELWMEQALMQLEEGEMSTVDKVSVLDYLSYAVYQQGDLD
FT                   KALLLTKKLLELDPEHQRANGNLVYFEYIMSKEKDANKSASGERADQKTTPKKKGIAVD
FT                   YLPERQKYEMLCRGEGIKMTPRRQKRLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRF
FT                   HDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINM
FT                   RIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMS
FT                   DVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWL
FT                   HERGQEFRRPCTLSELE"
XX
SQ   Sequence 1605 BP; 484 A; 325 C; 418 G; 378 T; 0 other; 2240007104 CRC32;
     atgatctggg gtgtattaat gatggggatt ctacttcctc agtgttcagc ccatccaggc        60
     ttttttactt caattggtca gatgactgac ttgatccata atgagaaaga cctggtgacg       120
     tcactaaaag attacattaa agcagaagag gacaagttag agcaaatcaa aaaatgggca       180
     gagaagttag accggctaac aagtacagca acaaaagatc cagaagggtt tgtcggacac       240
     cctgtaaatg cattcaagtt aatgaaacgt ctgaacaccg agtggagtga gttggagaat       300
     ctgatcctca aggatatgtc agatggcttc atctctaacc tgaccattca gaggcagtac       360
     ttccctaacg acgaagacca ggttggggct gcaaaagctt tgtttcgtct gcaagacacc       420
     tacaacctag acacgaatac catctcgaag ggcaatcttc caggagtgaa acacaagtct       480
     tttctaacag ctgaggactg ctttgagttg ggcaaagtgg cctatacaga agcagattat       540
     taccacacag aactctggat ggagcaggct ctgatgcagc tggaggaggg agagatgtct       600
     actgtagaca aagtctcggt tctagattat ttgagctatg cagtgtacca gcagggtgac       660
     ctggataagg cacttctgct tacaaagaaa cttcttgaac tagatcctga acaccagaga       720
     gccaatggta acttagtata ttttgagtat ataatgagta aagaaaaaga tgccaataag       780
     tctgcttcgg gtgagcgggc tgatcagaaa actacaccaa agaaaaaggg gattgctgtg       840
     gactacctgc cagagagaca gaagtacgaa atgctgtgcc gtggggaggg tatcaaaatg       900
     actcctcgga gacaaaaaag gctgttctgc cgctaccatg atggaaaccg gaatcctaaa       960
     tttatcctgg ccccagccaa gcaggaggat gagtgggaca agcctcgcat cattcgtttc      1020
     catgacatca tctcagatgc cgagattgag atcgtcaaag atttagcaaa gcccaggctg      1080
     agccgagcta cagtacatga ccctgagact gggaaattga ccacagcaca gtacagagta      1140
     tctaagagtg cttggctgtc tggctatgaa gatcctgtgg tgtctcgaat taatatgaga      1200
     atacaagatc tcacaggact ggatgtttcc acggcagagg aattacaggt agcaaattat      1260
     ggagttggag gacagtatga accccatttt gactttgcca ggaaagacga gccggatgct      1320
     tttagagagc ttgggacagg aaataggatt gccacgtggc tcttctacat gagtgatgtg      1380
     tctgctggag gcgctactgt ttttcctgaa gtgggagcca gtgtttggcc caaaaaaggc      1440
     actgctgtct tctggtacaa tctgtttgcc agtggagaag gagattacag tacacggcac      1500
     gcagcctgtc ctgtgctagt gggaaacaaa tgggtatcca acaaatggct ccatgaacgt      1560
     ggacaggaat ttcgaaggcc gtgtaccctg tcagaattgg aatga                      1605
//
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