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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA55407; SV 1; linear; mRNA; STD; PLN; 1701 BP.
XX
PA   X78852.1
XX
DE   Raphanus sativus (radish) malate synthase
XX
OS   Raphanus sativus (radish)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Raphanus.
OX   NCBI_TaxID=3726;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1701
FT                   /organism="Raphanus sativus"
FT                   /cultivar="Saxa Knacker"
FT                   /mol_type="mRNA"
FT                   /dev_stage="4 day old seedlings"
FT                   /clone_lib="lambda uniZAP-cRS"
FT                   /clone="cRS1"
FT                   /tissue_type="etiolated sedlings without roots"
FT   CDS             X78852.1:31..1731
FT                   /gene="MLS"
FT                   /product="malate synthase"
FT                   /EC_number="4.1.3.2"
FT                   /db_xref="GOA:Q43827"
FT                   /db_xref="InterPro:IPR019830"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q43827"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA55407.1"
FT                   /translation="MELETSVYRPNAAVYDSPDGVEVRGRYDQVFAKILTREALGFVAE
FT                   LQRDVSLGMLRYAWSAVERQNVVTTFVLSLGLTLPLSSSEIGEWVCSVCSPPAVADRRV
FT                   EITGPVERKMIINALNSGAKVFMADFEDALSPSWENLMKGQVNLKDAVDGTITFHDKAR
FT                   NKVYKLNDQVAKLFVRPRGWHLPEAHILIDGEPAIGCLVDFGLYFFHNYSKFRQTQGSG
FT                   YGPFFYLPKMEHSREAKIWNSVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYEL
FT                   RDHSVGLNCGRWDYIFSYVKTFQAHPDRLLPDRVLVGMGQHFMRSYSDLLIRTCHKRGV
FT                   HAWEGMAAQIAIRDDPKANDMALDLVKKDKLRQVRAGHDGTWAAHPGLIPICMDAFGHM
FT                   GKNPNQIKSMKRDDASAITEEDLLQIPRGVRTLDGLRLNTRVGIQYLAAWLTGSGSVPL
FT                   YNLTDEDAATAEISRVQNWQWIRYGVELKRRTGLEVRVSKELFGRVVEEEMERIEKEVG
FT                   KERSLREECIRKLARCLQSSVTAAELDDFLTLAVYDHIVAHYPINVSRL"
XX
SQ   Sequence 1701 BP; 462 A; 353 C; 465 G; 421 T; 0 other; 3937338434 CRC32;
     atggagctcg agacctcagt ttatcgacca aacgccgccg tgtatgattc ccccgatggt        60
     gtggaggttc gtggacgtta cgaccaagtc ttcgctaaga ttctgacaag agaagctctt       120
     ggttttgtag ctgagctaca gagagatgtt tcgttgggca tgttgagata cgcatggagt       180
     gccgtagaga ggcaaaacgt cgttacaact tttgtgctgt ccctgggttt gacccttcca       240
     ctaagttcat cagagatcgg tgaatgggtt tgtagcgtct gctcccctcc agctgttgct       300
     gaccggagag ttgagataac cggtccggtc gagaggaaga tgatcatcaa tgctcttaac       360
     tctggagcta aagtcttcat ggcagatttt gaggatgcac tgtctccaag ctgggagaat       420
     ctgatgaaag ggcaagtgaa cttgaaagat gcagtggatg gaaccattac gtttcacgac       480
     aaggcgagga acaaagttta caagctcaac gaccaagttg ctaagctctt tgtcaggcca       540
     cgtggttggc atcttccgga ggctcacatc ctcatcgacg gtgaaccagc cattggttgt       600
     ctcgtcgact tcggtcttta cttcttccac aactactcca agtttagaca gactcaaggt       660
     tccggttatg gacccttctt ctatcttccc aaaatggaac attctaggga agcaaagatc       720
     tggaacagtg tgtttgagcg agctgagaag atggctggta tagagcgagg aagcattaga       780
     gccacggtac tgatcgagac cctcccagct gttttccaga tgaatgagat actctatgaa       840
     ctgcgtgatc attcggtggg tctgaactgt ggaagatggg attatatatt cagctatgta       900
     aagaccttcc aggcccaccc tgaccgtctc ttaccagacc gcgtccttgt cggtatgggc       960
     cagcacttca tgaggagtta ctctgatctt ctcattcgta cgtgtcataa gcgtggtgtg      1020
     cacgcatggg aaggcatggc tgctcagatt gccataagag atgacccgaa agcgaatgac      1080
     atggcgttgg acctagtgaa gaaagacaag ctaaggcaag taagagcagg acatgatgga      1140
     acatgggctg ctcatccagg acttatccca atctgcatgg atgcattcgg ccacatgggg      1200
     aaaaatccaa accaaatcaa atcaatgaag cgtgatgacg cgtctgctat aacagaggaa      1260
     gatttgcttc agatacctag aggagtacga acactggacg gtctaaggct gaacacacgt      1320
     gtggggatcc aatacttagc cgcgtggcta acaggatcag gatctgtccc actctataac      1380
     ctgactgatg aagatgcagc tacggccgag ataagccgtg tccaaaactg gcagtggatt      1440
     aggtatggag tggagttgaa acggagaacg ggcttggaag ttagggtgag caaagagttg      1500
     tttgggagag ttgtggaaga agagatggaa agaatcgaga aagaagttgg caaggagaga      1560
     agtttaagag aggaatgtat aaggaagctt gcaagatgtt tacaaagcag tgtaactgcc      1620
     gctgagcttg atgattttct tacacttgct gtttatgatc atattgtagc tcattaccca      1680
     atcaatgtgt caaggctctg a                                                1701
//
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