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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA47631; SV 1; linear; mRNA; STD; PLN; 792 BP.
XX
PA   X67159.1
XX
DE   Nicotiana tabacum (common tobacco) pectate lyase
XX
OS   Nicotiana tabacum (common tobacco)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC   Nicotiana.
OX   NCBI_TaxID=4097;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..792
FT                   /organism="Nicotiana tabacum"
FT                   /strain="Samsun"
FT                   /mol_type="mRNA"
FT                   /dev_stage="mature pollen"
FT                   /clone_lib="lambda GT11"
FT                   /clone="TP10"
FT                   /germline
FT   CDS             X67159.1:176..967
FT                   /partial
FT                   /codon_start=3
FT                   /product="pectate lyase"
FT                   /db_xref="GOA:P40972"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/Swiss-Prot:P40972"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAA47631.1"
FT                   /translation="KNMKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQCASNIIIS
FT                   NLRIHNIVPTPGGLLRESEDHVGLRSGDEGDGISIFDSRDIWIDHISMSRATDGLIDAV
FT                   AASTNITISNCHFTDHEKVMLFGANDNYVLDKDMKITLAYNHFGKRLDQRMPRCRFGFF
FT                   HLVNNDYTHWERYAIGGSSGATIISQGNRFIAEDELLVKEVTYREKLTASVAEWMKWTW
FT                   ISDGDDMENGATFTPSGDQNLLDKIDHLNLIKPEPSSKVGI"
XX
SQ   Sequence 792 BP; 243 A; 156 C; 185 G; 208 T; 0 other; 4255970065 CRC32;
     ggaaaaacat gaaaattaaa cttagtaggg aacttatcgt gactagcaac aaaacaatcg        60
     acggccgtgg atttaatgtc catatacaaa atggagctgg cattaagata caatgtgcat       120
     ccaatattat tatttctaat ctccgcattc acaatattgt acccacccca ggtggcctgc       180
     tcagggagtc cgaggaccac gttggcctaa ggagtggcga tgaaggtgat ggcatcagca       240
     tcttcgattc gcgtgatata tggatcgacc acatctctat gtctcgtgca accgatggtc       300
     ttatcgatgc tgttgctgct tccactaaca ttaccatatc caattgccac ttcactgacc       360
     acgaaaaggt aatgttgttc ggcgccaacg ataattacgt gcttgacaag gacatgaaaa       420
     ttacattagc gtacaaccac tttggaaaga ggttggatca aaggatgcct agatgcaggt       480
     ttggattttt ccatctggtg aacaatgact acactcattg ggaaaggtac gctattgggg       540
     gaagcagtgg agccaccatc attagtcagg gtaatcgatt tattgctgag gacgaattgt       600
     tggtgaaaga ggtaacatat agggaaaaac ttacggcgag tgtggcggaa tggatgaaat       660
     ggacatggat atcagatggt gatgatatgg aaaatggtgc gacatttaca ccatctggtg       720
     accagaattt actcgataaa attgaccatc tcaatctcat taaaccagaa ccttcttcca       780
     aagttggaat tc                                                           792
//
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