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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA47066; SV 1; linear; genomic DNA; STD; INV; 1914 BP.
XX
PA   X66450.1
XX
DE   Euplotes octocarinatus partial DNA-directed RNA polymerase I largest 
DE   subunit
XX
OS   Euplotes octocarinatus
OC   Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC   Hypotrichia; Euplotida; Euplotidae; Euplotes.
OX   NCBI_TaxID=5937;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1914
FT                   /organism="Euplotes octocarinatus"
FT                   /strain="(68)-VIII"
FT                   /mol_type="genomic DNA"
FT                   /dev_stage="vegetative"
FT   CDS             X66450.1:79..>1992
FT                   /transl_table=10
FT                   /transl_except=(pos:X66450.1:277..279,aa:Cys)
FT                   /transl_except=(pos:X66450.1:286..288,aa:Cys)
FT                   /transl_except=(pos:X66450.1:307..309,aa:Cys)
FT                   /transl_except=(pos:X66450.1:346..348,aa:Cys)
FT                   /transl_except=(pos:X66450.1:1684..1686,aa:Cys)
FT                   /gene="RPA1"
FT                   /product="DNA-directed RNA polymerase I largest  subunit"
FT                   /EC_number="2.7.7.6"
FT                   /db_xref="GOA:P28363"
FT                   /db_xref="HSSP:1K83"
FT                   /db_xref="InterPro:IPR007080"
FT                   /db_xref="UniProtKB/Swiss-Prot:P28363"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA47066.1"
FT                   /translation="MATIFDSLISSRLDGTRFSFYNDEEIQQMSVKEIHNPMAYDELNN
FT                   PTSHGICDESMGVSALDKLSKCKTCGCDSVYCPGHMGHIKLTSTCYNPFTMKLLHSLLK
FT                   SKCLVCHRLRISPKRIELFEIRLKLIKLGYLVEAEKLSDFNHFSLESIDSAIRILRKKT
FT                   KGKTNKKEEKEDSEEVEEDKYAAKEALENLIQKEKENREIFYSHISSILQEDTPNESIG
FT                   NAITVAIRDITKEIMNSVVPSKCPHCDVCNPRIKKDGATKFFQMPLSNRDTKAMLSSHG
FT                   RIDMRIDISTMGAISEYDEEDDESSGESEVREGDEEQEKKQKYLSPIEVLEHMRRLWDV
FT                   EDTLLNELFDNYKIFFMNNLLVSQNRFRPESSGGKQSGDDRDYLHAHSAMLTKIINANI
FT                   AFRRTIELKENLTDDRNLETESEKSKTQQIDLSKTEITSKQVIKAWAELQESVNCYLDS
FT                   SLAAKLENKEKPGLRQLLERKEGIFRMKMMGKRVNFAGRSVISPDPYISTDQIGVPEFI
FT                   ARTITFPEPAKNIEKLKRCVINGAHKHPGANFIEYPNGERKALENMTLEEKKQSSIIRK
FT                   WRKIVYRHMQTGDPLLVNRQPTLHKPSIMAHNAIILPKEQTIRMHYSNCKSYNADFDGD
FT                   EMK"
XX
SQ   Sequence 1914 BP; 773 A; 254 C; 359 G; 528 T; 0 other; 1989666619 CRC32;
     atggcaacta tatttgactc tttgattagc tcaagacttg atggaactag attttcgttt        60
     tataacgatg aagaaattca gcaaatgagt gtgaaggaaa tacacaatcc aatggcttat       120
     gatgagttaa ataatccaac ttcacatgga atttgtgatg agtcgatggg tgtctcagca       180
     cttgataaac tttctaaatg aaaaacttga ggatgtgata gtgtgtattg acctggacac       240
     atgggacata taaaacttac ttcaacttga tataacccat tcacaatgaa acttcttcat       300
     agtcttctaa aatcaaaatg cttagtgtgt catcgtttaa gaatatcgcc aaaacgaatt       360
     gagctatttg aaattagatt aaagttgatc aaacttggat atttagttga agcagaaaag       420
     cttagtgact ttaatcattt tagtttagaa tcaattgatt cagcaataag aatacttcgt       480
     aagaaaacaa aaggaaaaac aaataaaaag gaagaaaaag aggattcaga ggaagttgaa       540
     gaagataaat atgctgcaaa agaagcacta gaaaatttaa tacaaaaaga aaaagaaaat       600
     agagagatat tctatagtca tatatcatca attttgcaag aagacactcc taatgaatca       660
     attggaaatg caattactgt agcaattaga gacattacaa aagaaattat gaattcagtt       720
     gttccatcta aatgccctca ctgtgatgta tgcaatccta gaataaagaa agatggagcc       780
     acaaaattct ttcaaatgcc tttatcaaat agagacacca aagcaatgtt gagttctcat       840
     ggtagaattg atatgaggat agacatttct actatgggag ctattagcga atatgatgaa       900
     gaagatgatg aaagcagtgg tgaatctgag gtaagagaag gagatgaaga gcaagagaag       960
     aaacagaaat atcttagtcc aatagaagtt ttagaacata tgaggagatt atgggatgtt      1020
     gaggatactc ttcttaatga actttttgat aactataaga tatttttcat gaataattta      1080
     cttgtcagtc aaaacagatt tagaccagaa tcatctggag gaaagcaatc aggtgatgat      1140
     cgagattatt tacatgccca ttcagcaatg ttaacaaaaa ttattaatgc aaatattgca      1200
     tttagaagaa caatagagct taaagagaac ttgactgatg atagaaatct agaaactgaa      1260
     agtgaaaaat caaaaacaca acaaatagat ttatctaaaa ctgagatcac atcaaagcaa      1320
     gtaataaaag catgggctga gcttcaagaa tctgttaatt gttatcttga ttcatcgttg      1380
     gcagctaaac ttgaaaataa agaaaaacca ggtttaagac agttattaga aagaaaggaa      1440
     ggaatattta gaatgaaaat gatgggaaag agagttaatt ttgcaggaag aagtgttatt      1500
     tctccagatc cttatatttc tacagatcaa attggagtac ctgaatttat tgctaggaca      1560
     ataacattcc ctgaaccggc taaaaatata gaaaagctga aaagatgagt tattaatggt      1620
     gcacataagc atccaggagc aaattttatc gaatatccaa atggagagag aaaagcatta      1680
     gaaaatatga ctttagaaga aaagaaacaa agcagcatta ttaggaagtg gaggaaaata      1740
     gtgtatagac atatgcagac aggagatcct ttacttgtta atagacaacc tacattacat      1800
     aaaccttcta ttatggctca taatgcaatt atattaccaa aagagcaaac tataagaatg      1860
     cattactcca attgtaaatc ttacaacgct gacttcgatg gtgacgaaat gaag            1914
//
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