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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA39776; SV 1; linear; genomic DNA; STD; PLN; 1323 BP.
XX
PA   X56336.1
XX
DE   Oryza sativa (rice) alpha-amylase
XX
OS   Oryza sativa (rice)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
OX   NCBI_TaxID=4530;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1323
FT                   /organism="Oryza sativa"
FT                   /chromosome="9"
FT                   /cultivar="M202"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="EMBL3"
FT                   /clone="3.5kb EcoRI from lambda OSg 7D"
FT                   /tissue_type="etiolated leaf"
FT   CDS             join(X56336.1:453..551,X56336.1:678..810,
FT                   X56336.1:1220..2025,X56336.1:2117..2401)
FT                   /gene="RAmy3A"
FT                   /product="alpha-amylase"
FT                   /EC_number="3.2.1.1"
FT                   /db_xref="GOA:P27932"
FT                   /db_xref="HSSP:1AVA"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/Swiss-Prot:P27932"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAA39776.1"
FT                   /translation="MGKQMAALCGFLLVALLWLTPDVAHAQTQILFQGFNWDSWKKQGG
FT                   WYNMLKDQVGDIASAGVTHVWLPPPTHSVSPQGYMPGRLYDLNASKYGTKAELKSLIAA
FT                   FHAKGIKCVADIVVNHRCADDKDGRGVYCIFKGGGPRGCLDWGPSMICCDDTQYSDGTG
FT                   HRDTGADFAAAPDIDHLNPLVQRELSDWLRWLRRDVGFDGWRLDFAKGYSAAVARTYVQ
FT                   NARPSFVVAEIWNSLSYDGDGKPAANQDGQRQELVNWVKQVGGPATAFDFTTKGILQSA
FT                   VQGELWRMRDKDGKAPGMIGWYPEKAVTFVDNHDTGSTQRMWPFPSDKVILGYAYILTH
FT                   PGVPCIFYDQVFDWNLKQEINALAATRKRNGINAGSKLRVLAAESDMYVAMVDERVITK
FT                   IGPRIEVGNIIPSDFHIVAHGNDYCVWEKSGLRVPEPEGRR"
XX
SQ   Sequence 1323 BP; 263 A; 426 C; 430 G; 204 T; 0 other; 3840558524 CRC32;
     atggggaagc aaatggccgc cctgtgtggc tttctcctcg tggcgttgct ctggctcacg        60
     cccgacgtcg cgcacgcgca gacgcagatc ctcttccagg gttttaactg ggactcgtgg       120
     aagaagcagg gtggttggta caacatgctc aaggaccagg tgggcgacat cgccagcgcc       180
     ggcgtcacgc acgtctggct cccacctccc acgcactccg tctcgcctca aggctacatg       240
     ccgggacggc tctacgacct gaacgcgtcc aagtacggca ccaaggcgga gctcaagtcg       300
     ctcatcgccg ccttccacgc caagggcatc aagtgcgtcg cggacatcgt cgtcaaccac       360
     cgctgcgccg acgacaagga cggccgcggc gtctactgca tcttcaaggg cggcggcccg       420
     cgcggctgcc tggactgggg cccctccatg atctgctgcg acgacacgca gtactccgac       480
     ggcacgggcc accgcgacac cggcgccgac ttcgccgcgg cgcccgatat cgaccacctc       540
     aacccgctcg tccagcggga gctctccgac tggctcaggt ggctcaggag ggatgtcggc       600
     ttcgacggct ggcgcctcga cttcgccaag ggctactcgg cggccgtcgc caggacgtat       660
     gtccagaacg ccaggccgag cttcgtcgtg gcggagatat ggaactccct gagctacgac       720
     ggcgacggga agccggcggc caaccaggac ggccagcggc aggagctcgt gaactgggtg       780
     aagcaggttg gcggcccggc gacggcgttc gacttcacga ccaagggcat cctgcagtcg       840
     gcggtgcagg gcgagctgtg gcggatgcgg gacaaggacg gcaaggcgcc gggcatgata       900
     ggctggtatc ccgagaaggc cgtcaccttc gtcgacaacc acgacaccgg ctcgacgcag       960
     cggatgtggc cattcccgtc tgacaaggtc attctgggct acgcctacat cctcacccac      1020
     ccaggagtac catgcatctt ctacgaccaa gtgttcgact ggaacctcaa gcaagagatc      1080
     aacgcgctgg cggcgacgag gaagcgcaac gggataaacg ccgggagcaa gctgcgcgtc      1140
     ctggcggcgg agagcgacat gtacgtggcg atggtcgacg agagggtcat caccaagatc      1200
     gggccgagaa tagaagtggg caacataatc ccgtcggact tccacatcgt ggctcatggc      1260
     aatgactact gcgtctggga gaagagcggc cttagagtcc cagaaccaga aggtcggcgc      1320
     tag                                                                    1323
//
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