spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA21631; SV 2; linear; genomic DNA; STD; INV; 1398 BP.
XX
PA   AL032639.1
XX
DE   Caenorhabditis elegans C. elegans protein Y38F1A.6, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1398
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="II"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="Y38F1A"
FT   CDS             complement(join(AL032639.1:45316..45428,
FT                   AL032639.1:45478..45595,AL032639.1:45646..45957,
FT                   AL032639.1:46009..46600,AL032639.1:46655..46737,
FT                   AL032639.1:46787..46854,AL032639.1:46930..47041))
FT                   /locus_tag="Y38F1A.6"
FT                   /standard_name="Y38F1A.6"
FT                   /product="C. elegans protein Y38F1A.6, confirmed by
FT                   transcript evidence"
FT                   /note="contains similarity to Pfam domain PF00465
FT                   Iron-containing alcohol dehydrogenase contains similarity
FT                   to Interpro domains IPR018211 (Alcohol dehydrogenase,
FT                   iron-type, conserved site), IPR001670 (Alcohol
FT                   dehydrogenase, iron-type)"
FT                   /db_xref="GOA:Q9U2M4"
FT                   /db_xref="InterPro:IPR018211"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9U2M4"
FT                   /db_xref="WormBase:WBGene00012608"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA21631.2"
FT                   /translation="MSASLARGILSKMGGSCCPHHAPATNPFKLAKLHGNNKSTDYAFE
FT                   MVCSTLRFGKGVTLEIGYDVRNLGAKKTLLITDKNVQNTIAFKNAEQALKMVNIEYEVF
FT                   DDVLIEPTVNSMQKAIAFAKSKQFDSFIAVGGGSVIDTTKAAALYASNPEADFLDFVGP
FT                   PFGKSMQPKNPMLPLIAVPTTAGTGSETTAAAIMDLPEHKCKTGIRLRCIKPYLAVVDP
FT                   LNVMSMPRNVAIYSGFDVLCHALESFTALPFDQRSPRPENPGVRPLYQGSNPISDVWSK
FT                   EALRIIGKYFRRSIFDPTDEEARTEMLKASSFAGIGFGNAGVHLCHGLSYPISSQAKSC
FT                   VADDYPKEKNLIPHGLSVMTTAVADFEFTTAACPDRHLISAQTLGADIPNNASNEYISR
FT                   TLCDRLRGYMRDFGVPNGLKGMGFEFSDIEMLTEAASHSVPNIAISPKSADREIISTLY
FT                   EKSLTVY"
XX
SQ   Sequence 1398 BP; 384 A; 324 C; 328 G; 362 T; 0 other; 1937779091 CRC32;
     atgagtgcaa gtctggcacg tggaatactg agcaagatgg gcggctcatg ctgtcctcac        60
     catgccccag ctacaaatcc attcaaactt gcaaagcttc atggaaataa caagtcaaca       120
     gattacgcgt tcgagatggt gtgctcaact cttcgtttcg gaaaaggagt cacgttggag       180
     attggatacg acgtccgtaa tctcggagca aagaaaacgt tgcttatcac tgataagaat       240
     gtgcagaata cgatcgcttt taaaaacgcc gagcaagcct taaaaatggt gaatatcgag       300
     tatgaggtgt ttgatgatgt gctcattgag ccaaccgtca acagtatgca gaaagcaatc       360
     gcatttgcca aatcgaagca attcgatagt ttcatcgctg ttggtggagg atctgtgatc       420
     gacacgacga aggctgcagc tctatatgct tctaatccag aagcggactt cctcgacttt       480
     gttggaccac cattcggaaa atccatgcaa ccaaagaacc caatgctccc attgatcgct       540
     gtgccaacaa ctgctggaac tggatccgag actaccgcgg ctgcaatcat ggatcttcca       600
     gagcacaagt gcaagactgg aatcagactt cgttgcatca agccgtactt ggcagttgtg       660
     gatccgttga atgtgatgag tatgcctcga aacgtggcaa tctattctgg tttcgatgtt       720
     ctctgtcacg cgttggaaag cttcacagct ttgccattcg atcaaagatc tccacgccct       780
     gagaatccag gagttcgtcc actttatcaa ggttccaacc cgatcagtga tgtctggagt       840
     aaagaggctt tgagaatcat tggaaaatac ttccgccgtt ctatcttcga tccaaccgac       900
     gaagaagctc gtacagaaat gctcaaggct agttcatttg ctgggattgg attcggaaac       960
     gctggggttc atctttgcca cggactctcc tacccaatca gctcccaggc gaaaagctgt      1020
     gtggctgatg attatccaaa ggagaagaac ttgattccac atggactctc tgtaatgaca      1080
     accgcagtgg ctgatttcga gtttacaact gccgcgtgcc cagatagaca tttgatttct      1140
     gcacagactc ttggtgcaga tattccgaac aatgccagca atgagtacat ttcccgaact      1200
     ctttgtgatc ggctgagagg ttatatgcga gactttggag ttccaaatgg actgaaagga      1260
     atgggattcg aattttctga tattgaaatg cttactgaag cagccagcca ctccgtccca      1320
     aatattgcaa tctctccaaa gtctgcggat cgtgaaatta tcagcactct gtacgagaag      1380
     tcccttacgg tttattag                                                    1398
//
spacer
spacer