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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA19974; SV 1; linear; genomic DNA; STD; PRO; 1677 BP.
XX
PA   AL939124.1
XX
DE   Streptomyces coelicolor urease alpha subunit
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             AL939124.1:38984..40660
FT                   /transl_table=11
FT                   /gene="SCO5526"
FT                   /gene_synonym="ureC"
FT                   /product="urease alpha subunit"
FT                   /note="SC1C2.07, ureC, probable urease alpha subunit, len:
FT                   558 aa; similar to many e.g. URE1_YEREN urease alpha
FT                   subunit (EC 3.5.1.5) (571 aa), fasta scores; opt: 1676
FT                   z-score: 1972.3 E(): 0, 45.2% identity in 564 aa overlap.
FT                   Contains PS01120 Urease nickel ligands signature and Pfam
FT                   match to entry PF00449 urease, Urease, score 758.30,
FT                   E-value 3.3e-224"
FT                   /db_xref="GOA:O86508"
FT                   /db_xref="HSSP:1EJX"
FT                   /db_xref="InterPro:IPR011612"
FT                   /db_xref="UniProtKB/Swiss-Prot:O86508"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA19974.1"
FT                   /translation="MTIDPYAYAAAHGPRAGDRLRLGDSGLVIRVESDAQHYGDEFLAG
FT                   FGKTARDGLHLKAAAVRDTCDVVISNVVVIDAVQGIRKVSIGIREGRVHAIGRAGNPDT
FT                   LDGVDVVVGTGTSIVSGEGLIATAGAVDTHVHLLSPRIMEASLASGVTTIIGQEFGPVW
FT                   GVGVNSPWALKHAFGAFDAWPVNIGFLGRGSSSHEAPLIEALAEGGASGFKVHEDMGAH
FT                   TRALDTALRVAEEHDVQVALHSDGLNECLSVEDTLRVLDGRTIHAFHIEGCGGGHVPNV
FT                   LKMAGVPHVIGSSTNPTLPFGRDAVAEHYGMIVSVHDLKTDLPGDAAMARDRIRAGTMG
FT                   AEDVLHDLGAIGITSSDAQGMGRAGETVRRTFAMAGKMKAQFGAEGDDDNARVLRYIAK
FT                   LTINPALAHGLAHEVGSIEVGKLADLVLWRPDHFGAKPQLVLKSGFPAYGVVGDPNAAT
FT                   DTCEPLVLGPQFGAHGATPAEISVAFVAQAALDQGGDTMPTRRRRVAVRGTRGIGPADL
FT                   RLNSRTGAVDVDQRTGLVTLDGDPLRSEPAESVSLNRLYFL"
XX
SQ   Sequence 1677 BP; 240 A; 673 C; 547 G; 217 T; 0 other; 3284985764 CRC32;
     atgaccatcg acccgtacgc ctacgccgcc gcccacggcc cgcgcgccgg cgaccggctc        60
     cgcctcggcg actcggggct ggtgatccgc gtcgagtccg acgcgcagca ctacggcgac       120
     gagttcctcg ccggcttcgg caagaccgcc cgggacggac tgcacctcaa ggccgccgcc       180
     gtccgcgaca cctgcgacgt cgtgatcagc aacgtggtcg tgatcgacgc cgtgcagggc       240
     atccggaagg tgtcgatcgg catccgcgag gggcgcgtcc acgccatcgg ccgggccggg       300
     aacccggaca ccctcgacgg cgtcgacgtc gtggtcggca ccggcacctc catcgtgtcc       360
     ggggaggggc tcatcgccac cgccggggcc gtggacaccc acgtccacct gctctccccg       420
     cggatcatgg aggcctcgct cgcgtccggc gtgacgacga tcatcgggca ggagttcggc       480
     cccgtgtggg gcgtcggcgt caactcgccc tgggcactga agcacgcgtt cggcgccttc       540
     gacgcctggc cggtgaacat cggcttcctc ggccggggct cctcgtccca cgaggccccg       600
     ctgatcgagg cgctggccga gggcggcgca tccggcttca aggtgcacga ggacatgggc       660
     gcccacaccc gcgccctcga caccgcgctg cgcgtcgccg aggagcacga cgtccaggtc       720
     gccctgcaca gcgacgggct gaacgagtgc ctgtccgtcg aggacaccct ccgggtcctg       780
     gacggccgca ccatccacgc cttccacatc gagggctgcg gcgggggaca cgtccccaac       840
     gtgctgaaga tggccggtgt cccccacgtc atcggctcct ccaccaaccc caccctgccc       900
     ttcggccggg acgcggtggc cgagcactac ggcatgatcg tctccgtcca cgacctcaag       960
     accgacctgc cgggcgacgc cgccatggcc cgcgaccgca tccgcgccgg gaccatgggc      1020
     gccgaggacg tgctgcacga cctgggcgcc atcggcatca cctcctccga cgcgcagggc      1080
     atgggccggg ccggcgagac cgtccgccgt accttcgcca tggccgggaa gatgaaggcg      1140
     cagttcggcg ccgagggcga cgacgacaac gcacgcgtcc tgcgctacat cgccaagctg      1200
     accatcaacc ccgccctcgc ccacggtctc gcgcacgagg tcggctccat cgaggtcggc      1260
     aagctcgccg acctcgtgct gtggcgcccg gaccacttcg gcgccaagcc gcagctggtc      1320
     ctcaagtcgg gcttcccggc gtacggcgtg gtcggcgacc ccaacgcggc caccgacacc      1380
     tgcgaacccc tggtcctcgg gccccagttc ggcgcgcacg gcgccacacc cgccgagatc      1440
     tcggtggcct tcgtcgcgca ggccgccctc gaccagggcg gcgacaccat gccgacccgc      1500
     cgacgccggg tggccgtgcg cggcacccgc ggcatcggac cggccgacct gcggctcaac      1560
     tcccgcaccg gcgcggtcga cgtcgaccag cgcaccggcc tggtcaccct cgacggcgac      1620
     ccgctgcgct ccgaacccgc cgagtcggtc tccctcaacc gcctctactt cctctga         1677
//
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