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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA19866; SV 1; linear; genomic DNA; STD; PLN; 2010 BP.
XX
PA   AL031032.1
XX
DE   Arabidopsis thaliana (thale cress) putative protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2010
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(AL031032.1:8227..8589,
FT                   AL031032.1:8679..9566,AL031032.1:9684..9847,
FT                   AL031032.1:9928..10147,AL031032.1:11776..11970,
FT                   AL031032.1:12094..12273))
FT                   /gene="F17I5.30"
FT                   /product="putative protein"
FT                   /note="similarity to xylan endohydrolase isoenzyme X-I,
FT                   Hordeum vulgare, PID:g1813595"
FT                   /db_xref="GOA:O81752"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:O81752"
FT                   /protein_id="CAA19866.1"
FT                   /translation="MLKELQSIRISGYIRLAIGLESHFKTPNIPYMRSALDILAATGLL
FT                   IWLTEIDVEAPPSVQAKYFEQVLRDGHAHPQVKGMVVWGGYSPSGCYRMCLTDGNFRNL
FT                   PTGDVWTCCYVNGEDFAAKQQCLENPYKPQYNGGIIVNPDLQNGSQGWSQFGNAKVDFR
FT                   EFGGNKFVVATQRNQSSDSISQKVYLEKGILYTFSAWLQVSIGKSPVSAVFKKNGEYKH
FT                   AGSVVAESKCWSMLKGGLTVDESGPAELFFESENTMVEIWVDSVSLQPFTQEEWNSHHE
FT                   QSIGKVRKGTVRIRVMNNKGETIPNATISIEQKKLGYPFGCAVENNILGNQAYQNWFTQ
FT                   RFTVTTFGNEMKWYSTERIRGQEDYSTADAMLSFFKSHGIAVRGHNVLWDDPKYQPGWV
FT                   NSLSGNDLYNAVKRRVYSVVSRYKGQLLGWDVVNENLHFSFFESKFGPKASYNTYTMAH
FT                   AVDPRTPMFMNEYNTLEQPKDLTSSPARYLGKLRELQSIRVAGKIPLAIGLESHFSTPN
FT                   IPYMRSALDTFGATGLPIWLTEIDVDAPPNVRANYFEQVLREGHAHPKVNGMVMWTGYS
FT                   PSGCYRMCLTDGNFKNLPTGDVVDKLLREWGGLRSQTTGVTDANGLFEAPLFHGDYDLR
FT                   ISHPLTNSKASYNFTLTSDDDSSQKQPSLYVFRV"
XX
SQ   Sequence 2010 BP; 556 A; 434 C; 481 G; 539 T; 0 other; 2386373090 CRC32;
     atgcttaagg agcttcaatc tattcggatt tccgggtata ttcggttagc gattggtctt        60
     gagtctcatt tcaagactcc taacattccg tacatgagat cagctcttga tattcttgct       120
     gccaccggtt tgcttatttg gctaactgag attgacgttg aagctcctcc cagtgtccag       180
     gccaagtact tcgagcaagt tctaagggat ggccatgcgc atccgcaggt gaaaggaatg       240
     gttgtgtggg gaggttattc accatcaggt tgctaccgaa tgtgcctcac cgatggaaac       300
     ttcagaaacc tacccactgg agatgtgtgg acatgttgct acgtgaatgg ggaggacttc       360
     gcagccaaac aacagtgtct agagaaccct tataaaccac agtacaatgg agggatcatc       420
     gtgaatcctg acttgcaaaa tggttcacaa ggctggtcac agtttggaaa cgccaaagtc       480
     gatttcagag aatttggagg caataagttt gttgttgcca cacaaaggaa tcaatcttct       540
     gacagcatct cgcagaaggt gtacttggaa aaaggaattc tctacacttt ctctgcttgg       600
     ttacaagtga gcataggaaa atctcccgtg agcgctgttt tcaagaagaa tggtgaatat       660
     aagcatgccg gttcggttgt tgctgaatcc aaatgttggt ccatgctgaa aggtggtctc       720
     actgttgatg aatctggtcc tgctgaactc ttcttcgaga gcgagaacac aatggttgag       780
     atttgggttg atagcgtctc tttgcaacct ttcacacaag aagagtggaa ctctcaccac       840
     gaacagagca ttggcaaagt aagaaaaggt accgtgagaa tcagagtcat gaataacaaa       900
     ggcgagacga tacctaatgc aaccatatcc atagaacaga agaaactcgg atacccattc       960
     gggtgcgcgg tagaaaacaa catacttggg aatcaagcat accaaaactg gttcactcaa      1020
     agatttaccg tgacaacttt cgggaacgag atgaaatggt acagcacaga aagaataaga      1080
     gggcaagagg attactcgac agctgacgcg atgttaagtt tcttcaagag ccacgggatt      1140
     gctgtacgtg ggcacaatgt tttatgggat gatcctaagt accaacctgg atgggtgaat      1200
     tctctgtctg gtaacgacct ctacaacgct gtgaaacgaa gggtttactc ggttgtctcg      1260
     cgatacaaag gacagctttt gggttgggat gttgtgaatg agaatcttca tttctccttc      1320
     tttgagagca agttcggtcc taaagcctct tataacacct acacaatggc ccatgccgtc      1380
     gatccaagga caccaatgtt catgaatgaa tataatacgt tagagcaacc taaggattta      1440
     acttctagtc cagcaaggta tttgggaaag cttagggagc ttcaatctat tcgggttgcc      1500
     ggaaagattc cgttagcgat aggtcttgag tctcatttca gcactcctaa cattccgtat      1560
     atgagatcag ctcttgatac ttttggtgcc actggtttgc ctatttggct cactgagatt      1620
     gacgttgatg cgcctcccaa tgtccgggcc aactatttcg agcaagttct aagggaaggc      1680
     catgcacatc cgaaagtgaa tggaatggtg atgtggacag gttattctcc atcaggttgc      1740
     taccgaatgt gcctcaccga tggaaacttt aagaacctac ccactggaga cgtcgtggac      1800
     aagcttttac gtgaatgggg agggcttcgc agccaaacca caggtgtcac tgatgctaat      1860
     gggttatttg aagctccact ctttcatggt gactatgatc tccgtatatc ccatcctctc      1920
     accaattcaa aggcttctta caactttacg ttgacttccg atgacgactc ctcacagaaa      1980
     caaccatctc tatatgtctt tcgtgtttga                                       2010
//
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