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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA19533; SV 1; linear; genomic DNA; STD; INV; 1041 BP.
XX
PA   AL023844.1
XX
DE   Caenorhabditis elegans C. elegans protein Y48A6B.9, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1041
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="III"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="Y48A6B"
FT   CDS             join(AL023844.1:43082..43242,AL023844.1:43289..43364,
FT                   AL023844.1:43551..43679,AL023844.1:44464..44733,
FT                   AL023844.1:45036..45147,AL023844.1:45243..45385,
FT                   AL023844.1:45636..45785)
FT                   /locus_tag="Y48A6B.9"
FT                   /standard_name="Y48A6B.9"
FT                   /product="C. elegans protein Y48A6B.9, confirmed by
FT                   transcript evidence"
FT                   /note="contains similarity to Pfam domains PF00107
FT                   (Zinc-binding dehydrogenase) , PF08240 (Alcohol
FT                   dehydrogenase GroES-like domain) (2)contains similarity to
FT                   Interpro domains IPR013149 (Alcohol dehydrogenase,
FT                   zinc-binding), IPR013154 (Alcohol dehydrogenase
FT                   GroES-like), IPR002085 (Alcohol dehydrogenase superfamily,
FT                   zinc-containing), IPR016040 (NAD(P)-binding domain)"
FT                   /db_xref="GOA:Q9XXC8"
FT                   /db_xref="HSSP:1GU7"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9XXC8"
FT                   /db_xref="WormBase:WBGene00012970"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA19533.1"
FT                   /translation="MQKTIRSQALIYRKFGDPLKVLQLETVEVPAEPGSGECLVEWLAS
FT                   PINPLDINRIQGNYAVRAELPVIGGSEGVGRVVKAGSGSRFKSGDHVTIFSANTPIWTE
FT                   FGVVDDDELVKLDNRIPLDLAATLMINPPTAWIMLKKYVNLQKGDYIIQNSANSGVGRS
FT                   VIEMCKALGYKSINIVRNRQNIEALKTDLWRIGADHVFTEEEFKGTSRQFLKSINVRPK
FT                   LALNGVGGKSALQISSVLERGGTCVTYGGMSKKAHEFTTSALVFNDICVRGVAVGMWAR
FT                   QEEHLDEWNLCVDEVQKLAVAGKITAIPMEKVVLADHKTAIQKSLEGRSIKQLFVINSK
FT                   ASASHI"
XX
SQ   Sequence 1041 BP; 301 A; 197 C; 269 G; 274 T; 0 other; 4240305949 CRC32;
     atgcaaaaaa ctattcgatc ccaagctctg atctaccgaa aattcggaga tcctctcaaa        60
     gttctgcagt tggaaactgt cgaagttccc gccgagccgg gcagtggaga gtgtctggta       120
     gagtggttgg cttctcctat taacccattg gatattaatc ggatccaagg aaactacgcg       180
     gtcagagccg agctaccggt gatcggaggc agtgaaggtg tcggcagggt tgtcaaggct       240
     ggctcgggct cccgcttcaa atctggagac catgtgacaa tattctcagc gaatacacct       300
     atttggacgg aattcggagt agttgatgac gatgagctag tcaaattgga taatagaatt       360
     cctttggatc tcgccgcaac tctcatgata aatccgccga cagcatggat tatgctcaaa       420
     aaatacgtga atcttcaaaa aggcgattat attattcaaa attctgcaaa ttccggtgtc       480
     ggtagaagtg ttatcgaaat gtgcaaagca ttaggctata aaagtattaa tatcgtcaga       540
     aatcggcaga atattgaagc tttgaagaca gatttatgga ggattggagc agatcacgtg       600
     tttactgaag aagagttcaa gggcacttct aggcagtttc tgaaatcaat caatgttcgt       660
     ccaaaacttg ccctaaacgg agtcggcggg aaaagtgctc tacaaattag ctctgtgctc       720
     gagagaggtg gcacgtgtgt cacgtatggt ggaatgtcga aaaaagcaca cgaattcaca       780
     acttctgcac tggttttcaa tgatatttgt gtgagaggtg ttgcagttgg aatgtgggct       840
     cggcaggaag agcatttaga tgaatggaat ctctgtgttg atgaggttca gaaactcgcg       900
     gttgctggaa aaatcacggc gattcctatg gaaaaagtgg tgttggcaga tcacaagact       960
     gcgattcaaa aatctttgga aggccggagc atcaaacagc tcttcgttat taattcgaag      1020
     gcttctgctt cgcatatttg a                                                1041
//
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