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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA18836; SV 1; linear; genomic DNA; STD; PLN; 1557 BP.
XX
PA   AL023094.2
XX
DE   Arabidopsis thaliana (thale cress) dihydrofolate reductase-thymidylate
DE   synthase
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1557
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(AL023094.2:47139..47249,
FT                   AL023094.2:47369..47475,AL023094.2:47562..47851,
FT                   AL023094.2:47943..48017,AL023094.2:48101..48162,
FT                   AL023094.2:48286..48351,AL023094.2:48460..48504,
FT                   AL023094.2:48595..48982,AL023094.2:49063..49475))
FT                   /gene="T4L20.150"
FT                   /product="dihydrofolate reductase-thymidylate synthase"
FT                   /note="Contains Dihydrofolate reductase signature
FT                   [GIGKDGKLPWNLPTDLKFFKDLT], Thymidylate synthase active
FT                   site, Thymidylate_Synthase [RRIIMSAWNPSDLKLMALPPCHMFAQFYV]"
FT                   /db_xref="GOA:Q05763"
FT                   /db_xref="HSSP:1HW4"
FT                   /db_xref="InterPro:IPR000398"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q05763"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAA18836.1"
FT                   /translation="MANTLNGNVIMTSKPQSTYQVVVAATKEMGIGKDGKLPWNLPTDL
FT                   KFFKDLTLSTSDSAKKNAVVMGRKTWESIPKKYRPLSGRLNVVLSRSSGFDIANTENVV
FT                   TCSSIDSALDLLAAPPFSLSIEKVFVIGGGDILREALNKPSCEAIHITEIDTSIDCDTF
FT                   IPTVDTSAYQPWCSSFPICENGLRFSFTTHVRVKSSSAGEASDESDGSKVLQVDWKKFS
FT                   SVLPKMIFDRHEEYLYLNLVKEIISNGNLKDDRTGTGTLSKFGCQMKFNLRRNFPLLTT
FT                   KRVFWRGVVEELLWFISGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVY
FT                   GFQWRHFGAKYTDMHADYTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSDLKLMALPP
FT                   CHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIG
FT                   DAHVYKNHVRPLQEQLENPPKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMA
FT                   V"
XX
SQ   Sequence 1557 BP; 436 A; 292 C; 352 G; 477 T; 0 other; 2176844593 CRC32;
     atggcaaaca ctctcaatgg aaatgtgatc atgacttcaa agcctcagag tacttaccaa        60
     gttgtggtag ctgcaaccaa ggaaatgggt attggtaaag acggaaaact tccatggaat       120
     ttgcctaccg atctcaagtt cttcaaggat ttaactttgt ccacttcgga ttctgctaag       180
     aagaacgctg ttgttatggg taggaaaacg tgggagtcta ttcccaaaaa gtataggcca       240
     ctctctggtc gcctgaatgt tgtcttgtct cgttctagcg gtttcgatat agccaacact       300
     gaaaatgttg taacttgcag tagcatagat tctgctctag acttattagc tgcacctccg       360
     tttagtctgt ccattgagaa agtgtttgta ataggaggtg gcgacatatt gagggaagct       420
     ttgaataaac cgagctgtga agccatccac ataactgaga ttgatacaag tatcgactgt       480
     gatacattta ttcccacggt tgacacttct gcatatcagc cttggtgttc gtcgtttcca       540
     atatgtgaaa atggtcttcg attttccttc acgactcatg ttcgtgtaaa gagttcttct       600
     gccggtgaag cctctgatga gagtgatggg tcaaaggttc ttcaagttga ttggaagaag       660
     ttttcttctg ttcttcctaa aatgattttt gaccggcatg aggaatatct ctacttaaat       720
     ctggtcaaag agataatctc aaatggaaac ttaaaagacg ataggacagg gactggtaca       780
     ttatctaaat ttggttgtca gatgaaattc aatttacgca ggaattttcc acttctgacg       840
     acaaagagag ttttctggag aggtgttgtt gaggaacttc tatggttcat aagcggttca       900
     accaatgcaa aggtacttca agaaaagggt atccgtatat gggatgggaa tgcgtcgaga       960
     gcatatcttg atggtattgg actgactgag agagaggaag gtgaccttgg acccgtttat      1020
     ggatttcagt ggagacactt tggtgctaag tacacagata tgcatgctga ttatactggc      1080
     caaggatttg atcagctctt agatgtaatt aacaagatca agaacaatcc tgatgatcga      1140
     cggattataa tgtcagcttg gaatccttct gatcttaagc tgatggcact tcctccatgc      1200
     cacatgtttg cacagtttta tgttgcaaat ggagaacttt catgtcaaat gtatcagcgt      1260
     tcagccgata tgggtctcgg cgtaccgttt aacattgcct catactccct tcttacatgc      1320
     attcttgctc acgtctgcga tcttgttcct ggtgatttta tccatgtgat tggagatgct      1380
     catgtttaca aaaaccatgt caggcctctg caagagcaac ttgagaaccc accaaaacct      1440
     tttcctgttt tgaagataaa tccagagaag aaagatatag attcttttgt tgcggatgac      1500
     tttgagctca ttggctatga tcctcacaag aaaatagata tgaaaatggc tgtttag         1557
//
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