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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA16367; SV 2; linear; genomic DNA; STD; INV; 1137 BP.
XX
PA   AL021488.1
XX
DE   Caenorhabditis elegans C. elegans protein Y45F10A.4, partially confirmed by
DE   transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1137
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="IV"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="Y45F10A"
FT   CDS             join(AL021488.1:16445..16625,AL021488.1:17068..17321,
FT                   AL021488.1:17920..18483,AL021488.1:19279..19416)
FT                   /gene="seld-1"
FT                   /locus_tag="Y45F10A.4"
FT                   /standard_name="Y45F10A.4"
FT                   /product="C. elegans protein Y45F10A.4, partially confirmed
FT                   by transcript evidence"
FT                   /note="C. elegans SELD-1 protein; contains similarity to
FT                   Pfam domains PF02769 (AIR synthase related protein,
FT                   C-terminal domain) , PF00586 (AIR synthase related protein,
FT                   N-terminal domain) contains similarity to Interpro domains
FT                   IPR000728 (AIR synthase related protein), IPR010918 (AIR
FT                   synthase related protein, C-terminal), IPR004536 (Selenide
FT                   water dikinase)"
FT                   /db_xref="GOA:O62461"
FT                   /db_xref="InterPro:IPR000728"
FT                   /db_xref="InterPro:IPR004536"
FT                   /db_xref="InterPro:IPR010918"
FT                   /db_xref="InterPro:IPR016188"
FT                   /db_xref="UniProtKB/Swiss-Prot:O62461"
FT                   /db_xref="WormBase:WBGene00012867"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA16367.2"
FT                   /translation="MNRIERILEGFDPVSNGLDEDFVLTKLTGMKGCGCKVPRNVLLQL
FT                   LQTFKTDLVINNDEVDIGLDSCVIPLRHPGLRLVQTTDFFYPLIDDPYIMGRVTCANVL
FT                   SDLYAMGVSECDNMLMLLAVAIDLNEKQRDIVVPLFIQGFKDAADEAGTKIRGGQTVRC
FT                   PWLLLGGVATSVAHESEIIKVDQAVPGDVLILTKPIGGQVAVNSYEWIKKKNGKIEELN
FT                   LEIPKIEKAFKQVCEQMSRLNRNAAKLLHKYDAHSSTDVTGFGLLGHAENLARVQKQPM
FT                   EFIIEKLPIIEYMDEIADKMIAKGGEGFKLYQGTSAETSGGLLIAMSEENAKKYIAELS
FT                   SLDNAPAWIIGKVTAKTTDSSIARILPDAVRISVPSHI"
XX
SQ   Sequence 1137 BP; 337 A; 218 C; 267 G; 315 T; 0 other; 1938492608 CRC32;
     atgaatcgaa tcgagagaat tttggaggga ttcgatccgg tgagcaatgg acttgatgaa        60
     gattttgtgc tcacaaagtt gactggaatg aagggttgtg ggtgtaaagt tccaaggaat       120
     gtgctccttc aattgctcca aacttttaaa actgatttag tcattaataa tgatgaagtt       180
     gacattggtc tcgatagttg cgtaattcca ctccgtcatc cgggtcttcg actcgtacaa       240
     accactgatt tcttctatcc actcattgat gatccatata ttatgggacg tgtaacatgt       300
     gccaatgtat tgtctgattt gtatgcaatg ggagtttccg agtgtgataa tatgcttatg       360
     ctgctcgcag tggctattga tttgaacgag aagcagagag atattgtcgt tccgttgttt       420
     attcagggat tcaaggatgc agctgacgaa gcaggcacaa agatccgtgg tggccaaaca       480
     gtccgttgtc cttggcttct gctcggcgga gttgccactt cagttgctca tgaatcagaa       540
     atcataaaag tagatcaagc agttcctgga gatgttctga tattgactaa accaattgga       600
     ggccaggttg ccgtgaactc gtacgaatgg atcaaaaaga agaacggaaa aattgaagag       660
     ctcaatctag aaattccaaa aatcgaaaaa gcattcaaac aagtctgcga gcaaatgagc       720
     cgtttgaata gaaatgcggc gaagcttctt cacaaatacg atgctcattc ttcaactgac       780
     gtcactggat ttggacttct aggccacgcc gagaatttgg cgcgagttca aaagcagcca       840
     atggagttta ttatcgaaaa gcttccaatc attgagtata tggatgaaat tgctgataaa       900
     atgattgcaa aaggaggaga gggattcaaa ttgtatcagg gaacatcagc agagacaagt       960
     ggtggacttt taattgcaat gtcggaagag aatgcaaaaa aatacattgc cgaactctcc      1020
     tctcttgaca acgcacccgc atggattatc ggcaaggtca ctgcaaaaac aacggattct      1080
     tcgattgccc gcattctgcc tgatgccgtt cgtatctctg ttccctctca tatttga         1137
//
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