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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA07673; SV 1; linear; genomic DNA; STD; PRO; 1287 BP.
XX
PA   AJ007747.1
XX
DE   Bordetella bronchiseptica putative 3-deoxy-D-manno-octulosonic-acid
DE   transferase
XX
OS   Bordetella bronchiseptica
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=518;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1287
FT                   /organism="Bordetella bronchiseptica"
FT                   /strain="CN7635E"
FT                   /mol_type="genomic DNA"
FT                   /clone="cosmid BbLPS1"
FT   CDS             AJ007747.1:39991..41277
FT                   /transl_table=11
FT                   /gene="waaA"
FT                   /product="putative 3-deoxy-D-manno-octulosonic-acid
FT                   transferase"
FT                   /note="BbLPS1.34, waaA, probable
FT                   3-deoxy-D-manno-octulosonic-acid transferase, len: 428 aa;
FT                   smilar to mnay e.g. KDTA_ECOLI
FT                   3-deoxy-D-manno-octulosonic-acid transferase (425 aa),
FT                   fasta scores; opt: 863 z-score: 606.0 E(): 1.7e-26, 40.0%
FT                   identity in 437 aa overlap. 99.5% identical to B. pertussis
FT                   waaA (TR:Q45374, EMBL:X90711)"
FT                   /db_xref="GOA:O88003"
FT                   /db_xref="InterPro:IPR007507"
FT                   /db_xref="UniProtKB/TrEMBL:O88003"
FT                   /protein_id="CAA07673.1"
FT                   /translation="MGRGVYTLALRGLAPLIWLWMWRRARRAGGQWELFAPARFGRAGA
FT                   RAPAPLAAPVWVHAVSLGETRAAQPLVQALLERGLPVLLTHTTATGRAEGERLFGAAIG
FT                   RGQLQQAWLPYDFPGATRRFLARHAPRCGLLIEREVWPNLLAAARAQGVPMALVSARFS
FT                   ASSLRQAGWLGQALREALAGLGRVLAQTDEDGARLCQAGANAYTVTGSLKFDVALPEAQ
FT                   LRVGHAWAGATGRPVIALASTREGEDAMFIEAIGALQAHRAATPRPLILLIPRHPQRFD
FT                   EAAAQLQAAGLAYARRSAGSGEPGPHIDVLLGDTLGEMPFYYAAADVAIVGGSFARLGG
FT                   QNLIEACAAGTPVIVGPHTFNFKDAARDAIAAGAALRAPDARTALDWALQLLAEPARRQ
FT                   AMSEAARAWTAAHAGATRRTLDALEDWLG"
XX
SQ   Sequence 1287 BP; 141 A; 446 C; 509 G; 191 T; 0 other; 3849539979 CRC32;
     atgggccgcg gcgtctatac cctggcgttg cggggcctgg cgccgttgat ctggctatgg        60
     atgtggcgcc gcgcgcggcg cgcgggcggc cagtgggagt tgttcgcgcc ggcccgcttc       120
     ggtcgcgccg gcgcgcgcgc gcccgcgccg ctggccgcgc cggtctgggt gcatgcggtc       180
     agcctgggcg agacgcgcgc ggcgcagccg ctggtccagg ccctgctgga gcgtggcctg       240
     cccgtcctgt tgacccatac caccgccacc ggccgggccg agggcgagcg cctgttcggc       300
     gcggcgatcg gacgcgggca attgcagcaa gcctggctgc cctacgattt tcctggcgcg       360
     acgcggcgct tcctggcgcg ccatgcgccc cgctgcggtt tgctgataga gcgggaagtc       420
     tggcccaatc tgctggcggc ggcgcgcgcg cagggggtgc cgatggcgct ggtcagcgcg       480
     cgcttttccg cttcgtcgct gcgccaggcc ggctggctgg gccaggcgct gcgtgaggcc       540
     ctggcgggcc tggggcgggt gctggcgcag accgacgagg atggcgcgcg cctgtgccag       600
     gctggtgcga atgcctacac ggtgaccggc agcctgaagt tcgacgtggc gctgcccgag       660
     gcgcaattgc gggtcggaca cgcctgggcc ggggcgacgg gccggcccgt gattgcgctg       720
     gcgagcacgc gcgagggcga ggatgccatg ttcatcgagg cgatcggcgc cttgcaggcg       780
     catcgcgccg ccacgccgcg gccgctgatc ctgctgattc ctcgccatcc ccagcgtttc       840
     gacgaggcgg ccgcccagtt gcaggcggcc ggcctggcct atgcgcggcg ctcggccggc       900
     tcgggcgagc ccggaccgca tatcgacgta ctgctgggcg ataccctggg cgagatgccg       960
     ttctactacg cggccgccga tgttgccatc gtggggggca gcttcgccag gctgggcggg      1020
     cagaacctga tcgaagcctg cgcggccggc acgccggtca tcgtcggccc gcatacgttc      1080
     aatttcaagg atgccgcccg ggacgccatt gcggcggggg cggcgctgcg tgcgcccgac      1140
     gcgcgcaccg cgctcgattg ggcgctgcag ctgctggccg agccggcacg ccggcaggcc      1200
     atgagcgagg ccgcgcgcgc ctggaccgcc gcgcatgccg gcgccacgcg gcgcacgctg      1260
     gacgcgctgg aggattggct gggatag                                          1287
//
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