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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAF08224; SV 1; linear; genomic DNA; ANN; PLN; 1503 BP.
XX
PA   AP008208.2
XX
DE   Oryza sativa Japonica Group hypothetical protein
XX
OS   Oryza sativa Japonica Group
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
OX   NCBI_TaxID=39947;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1503
FT                   /organism="Oryza sativa Japonica Group"
FT                   /chromosome="2"
FT                   /cultivar="Nipponbare"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(AP008208.2:6685393..6685501,
FT                   AP008208.2:6685957..6686159,AP008208.2:6686282..6686494,
FT                   AP008208.2:6686583..6686692,AP008208.2:6686778..6686881,
FT                   AP008208.2:6686976..6687145,AP008208.2:6687237..6687401,
FT                   AP008208.2:6687484..6687602,AP008208.2:6687753..6687840,
FT                   AP008208.2:6687935..6688040,AP008208.2:6688135..6688223,
FT                   AP008208.2:6688361..>6688387))
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="Os02g0219200"
FT                   /note="Similar to Beta-galactosidase precursor (EC
FT                   3.2.1.23) (Lactase) (Acid beta- galactosidase)
FT                   (Exo-(1-->4)-beta-D-galactanase)"
FT                   /note="The start codon is not identified."
FT                   /note="contains InterPro domain(s): IPR001944, IPR008979"
FT                   /note="has GO asignment(s): GO:0004565, GO:0005975,
FT                   GO:0009341"
FT                   /note="supported by AK059059"
FT                   /db_xref="GOA:Q6Z6K4"
FT                   /db_xref="InterPro:IPR001944"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6Z6K4"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="BAF08224.1"
FT                   /translation="KQDDAPDPVINTCNGFYCDYFSPNKNYKPSMWTEAWTGWFTSFGG
FT                   GVPHRPVEDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEFG
FT                   LLRQPKWGHLRDLHRAIKQAEPVLVSADPTIESIGSYEKAYVFKAKNGACAAFLSNYHM
FT                   NTAVKVRFNGQQYNLPAWSISILPDCKTAVFNTATVKEPTLMPKMNPVVRFAWQSYSED
FT                   TNSLSDSAFTKDGLVEQLSMTWDKSDYLWYTTYVNIGTNDLRSGQSPQLTVYSAGHSMQ
FT                   VFVNGKSYGSVYGGYDNPKLTYNGRVKMWQGSNKISILSSAVGLPNVGNHFENWNVGVL
FT                   GPVTLSSLNGGTKDLSHQKWTYQVGLKGETLGLHTVTGSSAVEWGGPGGYQPLTWHKAF
FT                   FNAPAGNDPVALDMGSMGKGQLWVNGHHVGRYWSYKASGGCGGCSYAGTYHEDKCRSNC
FT                   GDLSQRWYHVPRSWLKPGGNLLVVLEEYGGDLAGVSLATRTT"
XX
SQ   Sequence 1503 BP; 356 A; 400 C; 438 G; 309 T; 0 other; 3035954560 CRC32;
     aagcaggacg acgcccctga cccagtgatc aacacttgca atggatttta ctgcgactac        60
     ttcagcccaa acaagaatta caagccgtcc atgtggactg aggcctggac cggctggttt       120
     acatcgttcg gaggtggggt gccgcatcgg ccagtggagg atctggcttt tgccgtggcg       180
     aggttcatac agaagggtgg ctctttcgtg aactattaca tgtaccatgg aggaaccaat       240
     tttggccgga cagctggtgg tcccttcatt gcaaccagct atgattatga tgctccgatt       300
     gacgaatttg gtctgcttag gcaaccgaaa tggggtcact tgagagacct tcacagggcc       360
     atcaagcagg ctgagcctgt gctggtttct gccgatccga caatagagtc tattggcagc       420
     tatgagaagg catatgtctt caaggcaaag aatggagcat gcgcggcgtt cctgtcgaac       480
     taccacatga acactgcagt caaagtcagg ttcaatgggc agcagtacaa ccttcctgct       540
     tggtccatca gcattctgcc ggactgcaaa actgccgtct tcaacactgc aacggtgaag       600
     gagccaacat tgatgccaaa gatgaaccca gtggttcgat tcgcttggca gtcatatagc       660
     gaggacacaa actcgctgag cgacagcgcg ttcacgaagg atggccttgt tgagcagctg       720
     agcatgacat gggacaagtc agactacctg tggtacacca catacgtcaa cattggtaca       780
     aatgacttga ggtctggtca gtctcctcag ctcactgtct actccgctgg gcactcgatg       840
     caggtgttcg tgaacgggaa atcatatgga tctgtttatg gtggttacga caacccgaag       900
     ctgacataca atggacgtgt caagatgtgg cagggcagca acaagatctc catcctaagt       960
     tcagcagttg gcctccctaa tgttggcaac cattttgaga actggaatgt cggagtgctc      1020
     ggaccggtga ccctctccag cctaaatggg ggcacaaaag acctcagcca tcagaaatgg      1080
     acctatcagg tcggcctgaa aggcgaaacg ctgggtctcc acaccgtcac cggaagctcc      1140
     gcagtcgaat ggggtggccc tggcggctac cagccactga cttggcacaa ggctttcttc      1200
     aacgcgccgg ccgggaacga cccagtggcg ctcgacatgg gcagcatggg gaagggccag      1260
     ctctgggtga acggccacca cgtcggccgg tactggtcgt acaaggcctc cggtggctgc      1320
     ggcggctgca gctacgccgg gacgtaccac gaggacaagt gccggtccaa ctgcggcgac      1380
     ctgtcccaaa gatggtacca tgtgccgaga tcatggctga agccgggcgg caacctgctg      1440
     gtggtgctgg aggagtacgg cggcgacctc gccggcgtca gcctggcgac gagaaccaca      1500
     tga                                                                    1503
//
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