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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAD96534; SV 1; linear; mRNA; STD; HUM; 2157 BP.
XX
PA   AK222814.1
XX
DE   Homo sapiens (human) partial threonyl-tRNA synthetase-like 1 variant
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2157
FT                   /organism="Homo sapiens"
FT                   /mol_type="mRNA"
FT                   /clone_lib="HEP"
FT                   /clone="HEP06840"
FT                   /cell_line="HepG2"
FT                   /tissue_type="liver"
FT   CDS             AK222814.1:<29..2185
FT                   /codon_start=1
FT                   /product="threonyl-tRNA synthetase-like 1 variant"
FT                   /note="Start codon is not identified."
FT                   /db_xref="GDB:11523334"
FT                   /db_xref="GOA:Q9BW92"
FT                   /db_xref="HGNC:30740"
FT                   /db_xref="HSSP:1EVL"
FT                   /db_xref="InterPro:IPR012947"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9BW92"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="BAD96534.1"
FT                   /translation="MALYQRWRCLRLQGLQACRLHTAVVSTPPRWLAERLGLFEELWAA
FT                   QVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEP
FT                   YDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAVLCRGPSTEYGFYH
FT                   DFFLGKERTIRGSELPVLERICQELTAAARPFRRLEASRDQLRQLFKDNPFKLHLIEEK
FT                   VTGPTATVYGCGTLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGPPETLQRVSGISF
FT                   PTTELLRVWEAWREEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIR
FT                   AEYAHRGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHIT
FT                   DTLALKPMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDD
FT                   AHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRPSGFLGDPCLWDQAEQVLKQ
FT                   ALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAG
FT                   ALGRPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQS
FT                   LRAAGLVSDLDADSGLTLSRRIRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEW
FT                   DLPEAVQRLVELQNTRVPNAEEIF"
XX
SQ   Sequence 2157 BP; 480 A; 577 C; 625 G; 475 T; 0 other; 2909083072 CRC32;
     atggccctgt atcagaggtg gcggtgtctc cggctccaag gtttacaggc ttgcaggcta        60
     cacacggcag ttgtgtcgac ccctccacgc tggttggcag agcggcttgg cctttttgag       120
     gagctgtggg ctgctcaggt aaagagatta gcaagcatgg cacagaagga accccggact       180
     attaagatat cacttcctgg aggccagaaa attgatgctg tggcatggaa cacaaccccc       240
     taccaactag cccggcagat cagttcaaca ctggcagata ctgcagtggc tgctcaagtg       300
     aatggagaac cttatgatct ggagcggccc ttggagacag attctgacct cagatttctg       360
     acattcgatt ccccagaggg gaaagcagtg ttctggcact ccagcaccca tgtcctgggg       420
     gcagcagctg aacaattcct aggtgctgtt ctctgcagag gtccaagtac agaatatggc       480
     ttttaccatg atttcttcct gggaaaggag aggacaatcc ggggctcaga gctgcctgtt       540
     ttggagcgga tttgccagga acttacagct gctgctcgac ccttccggag gctagaggct       600
     tcacgggatc agcttcgcca gttgttcaag gataacccct ttaagcttca cttgattgag       660
     gagaaagtga caggtccaac agcaacagta tatgggtgtg gcacattggt tgacctttgc       720
     cagggccccc accttcggca tactggacag attggaggac tgaagctgct atcgaactca       780
     tcatccttat ggaggtcttc agggccccca gagacactgc agagagtgtc agggatttcc       840
     ttccccacaa cagaattgct gagggtctgg gaagcatgga gggaggaagc agaattgcgg       900
     gaccaccggc gcattgggaa ggaacaggag ctcttcttct tccatgaact gagccctggg       960
     agctgcttct tcctgccacg agggacaagg gtgtataatg cactagtggc gtttatcagg      1020
     gctgagtatg cccatcgtgg tttctccgag gtgaaaactc ccacactgtt ttctacgaag      1080
     ctctgggaac agtcagggca ctgggagcat tatcaggaag acatgtttgc cgtgcagccc      1140
     ccaggctctg acaggcctcc cagctcccag agtgacgatt ctaccaggca tatcacagat      1200
     acactcgccc tcaagcctat gaactgccct gcacactgcc tgatgttcgc ccaccggccc      1260
     agatcctggc gggaactgcc cctgcgacta gctgactttg gggctctaca ccgggccgaa      1320
     gcctctggtg gtctgggggg actgacccga ctgcggtgct tccagcagga tgacgctcac      1380
     atcttctgta caacagatca gctggaagca gagatccaaa gctgtcttga tttcctccgt      1440
     tccgtctatg ccgttcttgg cttctccttc cgcctggcac tgtccacccg gccatctggc      1500
     ttcctggggg acccttgcct ttgggaccag gccgaacagg tccttaaaca ggccctgaag      1560
     gaatttggag aaccctggga cctcaactct ggagatggtg ccttctatgg acctaagatt      1620
     gacgtgcacc tccacgatgc cctgggccgg ccacatcagt gtgggacaat tcagcttgac      1680
     ttccaactgc ccctgagatt tgacctccag tataaggggc aggcgggtgc cctggggcgt      1740
     ccagtcctca ttcaccgagc agtgctcggt tctgtggaaa gactgttggg agtgctggca      1800
     gaaagctgcg gggggaaatg gccactgtgg ctgtccccgt tccaggtggt ggtcatccct      1860
     gtggggagtg agcaagagga atacgccaaa gaggcacagc agagcctgcg ggctgcagga      1920
     ctggtcagtg acctggatgc agactctgga ctgaccctca gccggagaat ccgccgggcc      1980
     cagcttgccc actacaattt tcagtttgtg gttggccaga aagagcaaag taagagaaca      2040
     gtgaacattc ggactcgaga taatcgtcgc cttggggagt gggacttgcc tgaggctgtg      2100
     cagcgactgg tggagctaca gaacacgagg gtcccaaatg ccgaagaaat tttctga         2157
//
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