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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAD92537; SV 1; linear; mRNA; STD; HUM; 2286 BP.
XX
PA   AB209300.1
XX
DE   Homo sapiens (human) partial NACHT, leucine rich repeat and PYD containing
DE   2 variant
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2286
FT                   /organism="Homo sapiens"
FT                   /mol_type="mRNA"
FT                   /clone="fk07858"
FT                   /tissue_type="brain"
FT   CDS             AB209300.1:<34..2319
FT                   /codon_start=1
FT                   /product="NACHT, leucine rich repeat and PYD containing 2
FT                   variant"
FT                   /note="Start codon is not identified."
FT                   /db_xref="GOA:Q9NX02"
FT                   /db_xref="HGNC:22948"
FT                   /db_xref="HSSP:2BNH"
FT                   /db_xref="InterPro:IPR004020"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9NX02"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="BAD92537.1"
FT                   /translation="GQVLGAPTWDKMVSSAQMGFNLQALLEQLSQDELSKFKYLITTFS
FT                   LAHELQKIPHKEVDKADGKQLVEILTTHCDSYWVEMASLQVFEKMHRMDLSERAKDEVR
FT                   EAALKSFNKRKPLSLAFTETKGNVICLGKEVFKGKKPDKDNRCRYILKTKFREMWKSWP
FT                   GDSKEVQVMAERYKMLIPFSNPRVLPGPFSYTVVLYGPAGLGKTTLAQKLMLDWAEDNL
FT                   IHKFKYAFYLSCRELSRLGPCSFAELVFRDWPELQDDIPHILAQARKILFVIDGFDELG
FT                   AAPGALIEDICGDWEKKKPVPVLLGSLLNRVMLPKAALLVTTRPRALRDLRILAEEPIY
FT                   IRVEGFLEEDRRAYFLRHFGDEDQAMRAFELMRSNAALFQLGSAPAVCWIVCTTLKLQM
FT                   EKGEDPVPTCLTRTGLFLRFLCSRFPQGAQLRGALRTLSLLAAQGLWAQTSVLHREDLE
FT                   RLGVQESDLRLFLDGDILRQDRVSKGCYSFIHLSFQQFLTALFYTLEKEEEEDRDGHAW
FT                   DIGDVQKLLSGVERLRNPDLIQAGYYSFGLANEKRAKELEATFGCRMSPDIKQELLRCD
FT                   ISCKGGHSTVTDLQELLGCLYESQEEELVKEVMAQFKEISLHLNAVDVVPSSFCVKHCR
FT                   NLQKMSLQVIKENLPENVTASESDAEVERSQDDQHMLPFWTDLCSIFGSNKDLMGLAIN
FT                   DSFLSASLVRILCEQIASDTCHLQRVVFKNISPADAHRNLCLALRGHKTVTYLTLQGND
FT                   QDDVSRIV"
XX
SQ   Sequence 2286 BP; 553 A; 588 C; 671 G; 474 T; 0 other; 3785197578 CRC32;
     ggccaggtgt tgggagctcc cacgtgggac aagatggtgt cttcggcaca gatgggcttc        60
     aacctgcagg ctctcctgga gcagctcagc caggatgagt tgagcaagtt caagtatctg       120
     atcacgacct tctccctggc acacgagctc cagaagatcc cccacaagga ggtagacaag       180
     gctgatggga agcaactggt agaaatcctc accacccatt gtgacagcta ctgggtggag       240
     atggcgagcc tccaggtctt tgaaaagatg caccgaatgg atctgtctga gagagcaaag       300
     gatgaagtca gagaagcagc tttgaaatcc tttaataaaa ggaagcctct atcattagcg       360
     tttacagaaa cgaaaggaaa tgtcatctgc ctgggtaaag aagtctttaa aggaaaaaag       420
     ccagacaaag acaataggtg caggtatata ttgaagacga agttccggga gatgtggaag       480
     agctggcctg gagatagcaa agaggtccag gttatggctg agagatacaa gatgctgatc       540
     ccattcagca accccagggt gcttcccggg cccttctcat acacggtggt gctgtatggt       600
     cctgcaggcc ttgggaaaac cacgctggcc cagaaactaa tgctagactg ggcagaggac       660
     aacctcatcc acaaattcaa atatgcgttc tacctcagct gcagggagct cagccgcctg       720
     ggcccgtgca gttttgcaga gctggtcttc agggactggc ctgaattgca ggatgacatt       780
     ccacacatcc tagcccaagc acggaaaatc ttgttcgtga ttgacggctt tgatgagctg       840
     ggagccgcac ctggggcgct gatcgaggac atctgcgggg actgggagaa gaagaagccg       900
     gtgcccgtcc tcctggggag tttgctgaac agggtgatgt tacccaaggc cgccctgctg       960
     gtcaccacgc ggcccagggc cctgagggac ctccggatcc tggcggagga gccgatctac      1020
     ataagggtgg agggcttcct ggaggaggac aggagggcct atttcctgag acactttgga      1080
     gatgaggacc aagccatgcg tgcctttgag ctaatgagga gcaacgcggc cctgttccag      1140
     ctgggctcgg cccccgcggt gtgctggatc gtgtgcacga ctctgaagct gcagatggag      1200
     aagggggagg acccggtccc cacctgcctc acccgcacgg ggctgttcct gcgtttcctc      1260
     tgcagccggt tcccgcaggg cgcacagctg cggggcgcgc tgcggacgct gagcctcctg      1320
     gccgcgcagg gcctgtgggc gcagacgtcc gtgcttcacc gagaggatct ggaaaggctc      1380
     ggggtgcagg agtccgacct ccgtctgttc ctggacggag acatcctccg ccaggacaga      1440
     gtctccaaag gctgctactc cttcatccac ctcagcttcc agcagtttct cactgccctg      1500
     ttctacaccc tggagaagga ggaggaagag gatagggacg gccacgcctg ggacattggg      1560
     gacgtacaga agctgctttc cggagtagaa agactcagga accccgacct gatccaagca      1620
     ggctactact ccttcggcct cgctaacgag aagagagcca aggagttgga ggccactttt      1680
     ggctgccgga tgtcaccgga catcaaacag gaattgctgc gatgcgacat aagttgtaag      1740
     ggtggacatt caacggtgac agacctgcag gagctgctcg gctgtctgta cgagtctcag      1800
     gaggaggagc tggtgaagga ggtgatggct cagttcaaag aaatatccct gcacttaaat      1860
     gcagtagacg ttgtgccatc ttcattctgc gtcaagcact gtcgaaacct gcagaaaatg      1920
     tcactgcagg taataaagga gaatctcccg gagaatgtca ctgcgtctga atcagacgcc      1980
     gaggttgaga gatcccagga tgatcagcac atgcttcctt tctggacgga cctttgttcc      2040
     atatttggat caaataagga tctgatgggt ctagcaatca atgatagctt tctcagtgcc      2100
     tccctagtaa ggatcctgtg tgaacaaata gcctctgaca cctgtcatct ccagagagtg      2160
     gtgttcaaaa acatttcccc agctgatgct catcggaacc tctgcctagc tcttcgaggt      2220
     cacaagactg taacgtatct gacccttcaa ggcaatgacc aggatgatgt ttcccgcatt      2280
     gtgtga                                                                 2286
//
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