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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAD67951; SV 1; linear; genomic DNA; STD; PLN; 1413 BP.
XX
PA   AP002842.3
XX
DE   Oryza sativa Japonica Group putative homogentisate 1,2-dioxygenase
XX
OS   Oryza sativa Japonica Group
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
OX   NCBI_TaxID=39947;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1413
FT                   /organism="Oryza sativa Japonica Group"
FT                   /chromosome="6"
FT                   /cultivar="Nipponbare"
FT                   /mol_type="genomic DNA"
FT                   /clone="OSJNBa0075G19"
FT   CDS             complement(join(AP002842.3:79297..79509,
FT                   AP002842.3:79603..79686,AP002842.3:79783..79937,
FT                   AP002842.3:80061..80130,AP002842.3:80230..80405,
FT                   AP002842.3:80527..80694,AP002842.3:81121..81200,
FT                   AP002842.3:81300..81542,AP002842.3:81611..81834))
FT                   /codon_start=1
FT                   /gene="OSJNBa0075G19.26"
FT                   /product="putative homogentisate 1,2-dioxygenase"
FT                   /note="contains EST(s): AU055892(S20131),AU091710(S20131)"
FT                   /note="contains full-length cDNA(s): AK062144,AK065189"
FT                   /db_xref="GOA:Q5VRH4"
FT                   /db_xref="InterPro:IPR005708"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5VRH4"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="BAD67951.1"
FT                   /translation="MAMATATPAAQNEQQEKGGLEYVYLSGLGNSLSSEAVAGTLPRGQ
FT                   NSPLVCPLGLYAEQLSGTPFTAPRARNLRTWLYRIKPSVTHEPFHPRRPAHPRLIGDFD
FT                   RTTTDTVATPTQLRWRPADVPPHHPPLDFIDGLYTVCGAGSSFLRHGYAIHMYAANKSM
FT                   DGCAFCNADGDFLIVPQQGKLLITTECGKLLVPPGEIVVIPQGFRFAVDLPDGPSRGYV
FT                   SEIFGTHFQLPDLGPIGANGLASARDFLSPTAWFEQVHRPGYTIVQKYGGELFTATQDF
FT                   SPFNVVAWHGNYVPYKYDLSKFCPFNTVLFDHADPSVNTVLTAPTDKPGVALLDFVIFP
FT                   PRWLVAENTFRPPYYHRNCMSEFMGLIYGIYEAKADGFLPGGASLHSCMTPHGPDTKTY
FT                   EATISRPDANEPSRLSGTLAFMFESALIPRVCQWALDSPSRDLDYYQCWIGLKSHFSHD
FT                   NGGATSEEPCRK"
XX
SQ   Sequence 1413 BP; 296 A; 434 C; 353 G; 330 T; 0 other; 2262334325 CRC32;
     atggccatgg caacggcaac ccccgcggcg cagaatgagc agcaggagaa gggggggttg        60
     gagtacgtat atctgtcggg gctgggcaac agcttgtcgt cggaggcggt ggcggggacg       120
     ctcccgcgcg ggcagaacag cccgctggtc tgcccgctgg gactctacgc cgagcagctc       180
     tccggcacgc ccttcaccgc cccgcgcgcc cgcaacctcc gaacatggct gtaccggatc       240
     aagccttcgg tgacccacga gcccttccac ccccgtcgcc ccgcccaccc ccgcctcatt       300
     ggggatttcg accgcaccac caccgacacc gtcgccacgc ccacccagct gcgctggcgc       360
     cccgccgacg tgccccccca ccatcctccc ctcgatttca tcgatggcct ctacaccgtc       420
     tgcggcgctg gcagctcctt cctgcgccac ggatacgcca tccacatgta cgctgctaac       480
     aagtccatgg acggatgcgc cttttgcaac gctgacggcg atttcctcat tgtcccccag       540
     caaggaaagc tgttgatcac aactgaatgt gggaagctgc tagtcccacc tggtgaaatt       600
     gttgtcattc cccagggttt tcgctttgct gttgatttgc ccgatggtcc ttcacgtggc       660
     tatgtttctg agattttcgg tacccacttt cagctccctg atcttggccc gattggtgca       720
     aatggcttgg cttcggcaag ggatttcctt tccccaacag catggtttga gcaagtccac       780
     cgcccaggat acacaattgt gcagaaatat ggtggtgagc tattcactgc cactcaggac       840
     ttttctccat ttaatgtggt agcgtggcat ggaaattatg tcccttacaa gtacgacctg       900
     agtaaattct gtccatttaa cactgttcta ttcgatcatg ctgatccatc agtaaataca       960
     gtgctgactg caccaactga taagcctggt gtcgcattgc ttgattttgt gatattcccg      1020
     cctagatggt tggtcgctga gaacacattt cgccctccat actatcatcg caattgcatg      1080
     agtgaattta tgggattgat ctatggaata tacgaggcca aagctgatgg ttttcttcct      1140
     ggaggtgcta gccttcacag ttgcatgaca cctcatggcc cagacaccaa gacatacgag      1200
     gcaacaatca gccgtcctga tgccaatgag ccatcaaggc taagcggcac gcttgcattc      1260
     atgttcgagt ctgcactcat ccccagggtt tgccaatggg ccctcgattc cccatcccgg      1320
     gatctcgatt actaccagtg ctggattgga ttgaaatccc acttctcaca tgacaatgga      1380
     ggggcaacca gcgaagaacc atgcagaaag tag                                   1413
//
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