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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAD53603; SV 1; linear; genomic DNA; STD; PLN; 1398 BP.
XX
PA   AP003621.3
XX
DE   Oryza sativa Japonica Group putative HGA1
XX
OS   Oryza sativa Japonica Group
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
OX   NCBI_TaxID=39947;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1398
FT                   /organism="Oryza sativa Japonica Group"
FT                   /chromosome="6"
FT                   /cultivar="Nipponbare"
FT                   /mol_type="genomic DNA"
FT                   /clone="P0621D05"
FT   CDS             complement(join(AP003621.3:67546..68750,
FT                   AP003621.3:68883..68939,AP003621.3:69269..69404))
FT                   /codon_start=1
FT                   /gene="P0621D05.21"
FT                   /product="putative HGA1"
FT                   /db_xref="GOA:Q5Z8T8"
FT                   /db_xref="InterPro:IPR007657"
FT                   /db_xref="UniProtKB/TrEMBL:Q5Z8T8"
FT                   /protein_id="BAD53603.1"
FT                   /translation="MKAAVRSKKSKGSFCHPPLLLLIVAIQFLVIYSPTLDQYMVMLTT
FT                   GKPGFPSMLIDGRRSFKQVDEFIPEPHLRCDFRDNRSDVCEMEGAIRILGRTSEVFLVA
FT                   PSLASISGGGGGVNATGVDANATRWKIQPYTRKGESRVMPGITEVTVRLVTADEAPPCD
FT                   EWHDVPAIVYSNGGYCGNYYHDFNDNIIPLFITSRHLAGEVQLLVTQKQRWWFGKYREI
FT                   VEGLTKYEPVDLDAEQRVRCYRRATVGLHSHKDLSIDPRRAPNNYSMVDFKRFLMWRYA
FT                   LPREHAIRMEEEDKSKKPRLLVINRRSRRRFVNLDEIVAAAEGVGFEVAAAELDAHIPA
FT                   AASAVNSYDAMVAVHGSGLTNLVFLPMNAVVIQVVPLGRMEGLAMDEYGVPPRDMNMRY
FT                   LQYNITAEESTLSEVYPRAHPVFLDPLPIHKQSWSLVKDIYLGQQDVRLDVRRFRPVLL
FT                   KALHLLR"
XX
SQ   Sequence 1398 BP; 258 A; 444 C; 469 G; 227 T; 0 other; 653658509 CRC32;
     atgaaggcag ctgtgaggag caagaagagc aagggctctt tctgccaccc tcctctgctc        60
     ctgctcatcg tggcaatcca gttcttggtg atttactcac caacccttga tcagtacatg       120
     gtgatgctaa ccacaggcaa gcctggtttc ccatcaatgt tgattgatgg taggaggagc       180
     ttcaaacaag tagatgagtt catcccggag cctcacctgc gatgcgactt cagagacaat       240
     agatccgacg tgtgcgagat ggagggcgcc atccgcatcc tcggccgcac gtcggaggtg       300
     ttcctggtgg cgccgagcct cgcctccatc tccggcggcg gcggcggcgt gaacgcgacg       360
     ggcgtggacg cgaacgcgac gaggtggaag atccagccgt acacccgcaa gggcgagtcc       420
     cgcgtgatgc ccggcatcac ggaggtgacg gtgcggctgg tgaccgccga cgaggcgccg       480
     ccgtgcgacg agtggcacga cgtcccggcg atcgtgtact ccaacggcgg ctactgcggc       540
     aactactacc acgacttcaa cgacaacatc atcccgctgt tcatcacgtc gcgccacctc       600
     gccggcgagg tccagctgct ggtgacgcag aagcagcggt ggtggttcgg caagtacagg       660
     gagatcgtgg agggcctgac caagtacgag cccgtcgacc tcgacgccga gcagcgcgtc       720
     cgctgctacc gccgcgccac cgtcgggctc cacagccaca aggacctcag catcgacccg       780
     cggcgagctc cgaacaacta ctccatggtg gacttcaagc ggttcttgat gtggcggtac       840
     gcgctgccgc gggagcacgc gatccggatg gaggaggagg acaagagcaa gaagccgcgg       900
     ctgctggtga tcaaccggcg ctcccgccgc cggttcgtga acctggacga gatcgtggcg       960
     gcggcggagg gggtcgggtt cgaggtggcg gcggcggagc tggacgccca catcccggcg      1020
     gcggcgtcgg cggtgaactc gtacgacgcg atggtggcgg tgcacgggtc ggggctgacc      1080
     aacctggtgt tcctccccat gaacgcggtg gtgatccagg tggtgccgct ggggaggatg      1140
     gaggggctcg ccatggacga gtacggcgtg ccgccgcgcg acatgaacat gaggtacctg      1200
     cagtacaaca tcacggcgga ggagagcacg ctgtcggagg tgtacccgcg ggcgcacccg      1260
     gtgttcctcg acccgctccc catccacaag cagagctggt cgctcgtcaa ggacatctac      1320
     ctcgggcagc aggacgtccg cctcgacgtc cgccgcttcc gccccgtcct cctcaaggcc      1380
     ctccacctcc tccggtga                                                    1398
//
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