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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAD45673; SV 1; linear; genomic DNA; STD; PLN; 1143 BP.
XX
PA   AP004027.3
XX
DE   Oryza sativa Japonica Group putative endo-beta-1,4-glucanase precursor
XX
OS   Oryza sativa Japonica Group
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
OX   NCBI_TaxID=39947;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1143
FT                   /organism="Oryza sativa Japonica Group"
FT                   /chromosome="6"
FT                   /cultivar="Nipponbare"
FT                   /mol_type="genomic DNA"
FT                   /clone="OJ1136_C11"
FT   CDS             complement(join(AP004027.3:105546..106280,
FT                   AP004027.3:106511..106765,AP004027.3:107375..107527))
FT                   /codon_start=1
FT                   /gene="OJ1136_C11.27"
FT                   /product="putative endo-beta-1,4-glucanase precursor"
FT                   /note="contains full-length cDNA(s): AK065325"
FT                   /db_xref="GOA:Q654U4"
FT                   /db_xref="InterPro:IPR018221"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q654U4"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="BAD45673.1"
FT                   /translation="MTTSRQAYKVDRRRPGSDVAGETAAAMAAASIVFRQSNPHYSHLL
FT                   LHHAQQLFEFADTYRGKYDSSIAEVKSYYASVSGYHDELLWAALWLHRATGRAAYLDYA
FT                   VDNADEFGGTGWAITEFSWDVKYAGVQILAARLLMRGEHEERHRGTLERYREKAEHYVC
FT                   ACMGRNAAGGADANVERSPGGMLYVRQWNNMQYVTNAAFLLSAYSDYLAGAGDGDGDGG
FT                   GGVATCVGGGGAGAGEVFAAAREQVDYVLGSNPRGMSYLVGYGERFPARVHHRAASIVP
FT                   YKDSKEFIGCAQGFDDWFGRRGANPNVVVGAIVGGPDRRDRFRDDRENYMQTEACTYNT
FT                   APMVGMFAMLNRLSRQESPSTTTTTTATTSSPEMGLSVNR"
XX
SQ   Sequence 1143 BP; 208 A; 372 C; 419 G; 144 T; 0 other; 826842977 CRC32;
     atgacgacgt cgaggcaggc gtacaaggtg gaccgccgcc gcccgggatc cgacgtcgcc        60
     ggcgagaccg ccgccgccat ggccgccgcc tccatcgtct tccgccaatc caacccgcac       120
     tactcccacc tcctcctcca ccacgcccag cagctgttcg agttcgcgga cacgtacagg       180
     gggaagtatg acagtagcat agcggaggtg aagagctact acgcgtcggt gagcgggtac       240
     cacgacgagc tcctgtgggc ggcgctgtgg ctgcaccgcg ccaccggccg cgccgcctac       300
     ctcgactacg ccgtcgacaa cgccgacgag ttcggcggca ccggctgggc catcaccgag       360
     ttcagctggg acgtcaagta cgccggcgtc cagatcctcg ccgccagact gctgatgaga       420
     ggggagcacg aggagaggca cagggggacg ctggagaggt acagggagaa ggcggagcac       480
     tacgtgtgcg cgtgcatggg gcggaacgcg gccggcggcg cggacgccaa cgtggagcgg       540
     agccccggcg ggatgctgta cgtgcggcag tggaacaaca tgcagtacgt caccaacgcc       600
     gcgttcctcc tctccgccta ctcggactac ctcgccggcg ccggagacgg agacggggac       660
     ggcggcggcg gcgtcgcgac gtgcgtgggc ggcgggggcg cgggcgccgg ggaggtgttc       720
     gcggcggcga gggagcaggt ggactacgtg ctggggagca acccgcgcgg gatgagctac       780
     ctcgtcggct acggcgagag gttcccggcg agggtgcacc accgggcggc gtcgatcgtg       840
     ccgtacaagg acagcaagga gttcatcggg tgcgcgcagg ggttcgacga ctggttcggc       900
     cgccggggcg ccaaccccaa cgtcgtcgtc ggcgccatcg tcggcggccc ggaccgccgc       960
     gacaggttcc gcgacgaccg cgagaactac atgcagacgg aggcgtgcac gtacaacacg      1020
     gcgcccatgg tcggcatgtt cgccatgctc aaccggctgt cccggcaaga gtcgccgtcg      1080
     acgacaacga cgacgacggc gacgacgagt agcccggaaa tgggcctaag tgtaaataga      1140
     tag                                                                    1143
//
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