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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAD28450; SV 1; linear; genomic DNA; STD; PLN; 1329 BP.
XX
PA   AP005290.2
XX
DE   Oryza sativa Japonica Group N-acetylglucosaminyltransferase I-like protein
XX
OS   Oryza sativa Japonica Group
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
OX   NCBI_TaxID=39947;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1329
FT                   /organism="Oryza sativa Japonica Group"
FT                   /chromosome="2"
FT                   /cultivar="Nipponbare"
FT                   /mol_type="genomic DNA"
FT                   /clone="OJ1282_E10"
FT   CDS             complement(join(AP005290.2:21807..21917,
FT                   AP005290.2:22155..22325,AP005290.2:22396..22434,
FT                   AP005290.2:22533..22595,AP005290.2:22734..22827,
FT                   AP005290.2:22915..23005,AP005290.2:23091..23152,
FT                   AP005290.2:23255..23324,AP005290.2:23412..23480,
FT                   AP005290.2:23567..23633,AP005290.2:24567..24629,
FT                   AP005290.2:24712..24757,AP005290.2:25088..25164,
FT                   AP005290.2:25236..25270,AP005290.2:26026..26088,
FT                   AP005290.2:26178..26265,AP005290.2:26573..26623,
FT                   AP005290.2:26747..26815))
FT                   /codon_start=1
FT                   /gene="OJ1282_E10.3"
FT                   /product="N-acetylglucosaminyltransferase I-like protein"
FT                   /note="contains EST(s): C96708(C10601),D22247(C10601)"
FT                   /note="contains full-length cDNA(s): AK101526,AK058826"
FT                   /db_xref="GOA:Q6K959"
FT                   /db_xref="InterPro:IPR004139"
FT                   /db_xref="UniProtKB/TrEMBL:Q6K959"
FT                   /protein_id="BAD28450.1"
FT                   /translation="MARSPCDLRILLVAAAAAFIYIQVRLFSTQSHYADRLAQAEKSEN
FT                   QCTSQLRSLIDQVSSQQEKIVALEEMKIRQDEERVHLKILIQDLEKRSVQTLVNNNVAP
FT                   VAAVVVMACNRPDYLQRTVESILKYQTSVASKFPLFISQDGINGEVKKKALSYNEITYM
FT                   QHLDLEPVRTERPGELIAYYKIAKHYKWALDELFIKHNFARVIILEDDMEIAPDFFDYF
FT                   EAAAKLLDNDKTIMAVSSWNDNGQKQFVYDPKALYRSDFFPGLGWMLTKPTWIELSPKW
FT                   PKAYWDDWVRLKEVHRDRQFIRPEVCRTYNFGEHGSSMGQFFRQYLEPIKLNDAHIKWN
FT                   SEDLSYLKEDKFLIQFGKDVASATPLHGSDAALKAHNMDADVRIQYNDQEDFERIARQF
FT                   GIFEEWKDGIPRTAYKGVVVFRYKSSRRRIYLVGPDSLSQLRV"
XX
SQ   Sequence 1329 BP; 399 A; 294 C; 308 G; 328 T; 0 other; 2346485188 CRC32;
     atggcgcgga gcccctgcga cctccgcatc ctcctcgtcg ccgccgctgc agccttcatc        60
     tacatccaag tccgcctttt ttctactcag tcccactacg ccgaccgcct cgcacaagca       120
     gaaaaatccg aaaaccaatg caccagtcaa ctccgctcct tgatcgatca agtcagctct       180
     cagcaggaga agattgtcgc gttggaagag atgaagatac gccaagacga agaacgtgta       240
     cacctcaaga ttttaatcca agatctcgaa aaaaggagcg tgcagacctt agtaaacaac       300
     aatgtggctc ctgttgctgc tgttgttgta atggcttgca atcgaccaga ctatttgcaa       360
     aggacagttg aatctatcct gaagtatcag acatcagtgg cttcaaagtt tccactattt       420
     atatctcagg atggaataaa tggagaagtg aagaaaaaag ctttgagtta taatgaaata       480
     acatatatgc agcatttaga tcttgaacct gtgcgcactg aaaggccagg agagttgata       540
     gcatattaca agatagccaa acattacaaa tgggccttgg atgagctatt catcaaacac       600
     aactttgcgc gagtaataat tctggaagat gatatggaga tcgcccctga tttttttgac       660
     tacttcgagg ctgcagctaa attacttgat aacgataaga caatcatggc cgtttcttcc       720
     tggaatgaca atggacaaaa gcaatttgtt tacgacccaa aagctcttta ccggtcggat       780
     ttctttcctg gacttggatg gatgttaaca aagcctacat ggattgagct gtcacctaag       840
     tggcccaaag cttattggga tgactgggtg aggctaaaag aggtacacag agaccggcaa       900
     tttattcgcc cggaagtctg cagaacatac aattttggcg aacatgggtc aagcatgggg       960
     caattcttca gacagtactt ggaaccaatc aagctaaatg atgcccatat caagtggaat      1020
     tctgaggacc tgagctacct caaggaggac aagttcctga tccaatttgg gaaagacgtc      1080
     gctagtgcca cccctctcca tggatctgat gccgcgttga aagcccacaa tatggatgcg      1140
     gatgtaagga tccagtataa cgatcaggaa gactttgagc ggatagctcg tcaatttgga      1200
     atatttgaag aatggaagga tggcattcca agaacagctt ataaaggagt agtagtcttc      1260
     cggtacaaga gtagtcgaag acgaatatac ctcgttggtc cggattccct cagtcagctt      1320
     agggtatag                                                              1329
//
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