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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAC10194; SV 1; linear; genomic DNA; STD; PLN; 1614 BP.
XX
PA   AP004380.2
XX
DE   Oryza sativa Japonica Group putative phospho-2-dehydro-3-deoxyheptonate
DE   aldolase 1, chloroplast precursor
XX
OS   Oryza sativa Japonica Group
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
OX   NCBI_TaxID=39947;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1614
FT                   /organism="Oryza sativa Japonica Group"
FT                   /chromosome="7"
FT                   /cultivar="Nipponbare"
FT                   /mol_type="genomic DNA"
FT                   /clone="P0594D10"
FT   CDS             complement(join(AP004380.2:127113..127391,
FT                   AP004380.2:127810..128055,AP004380.2:128162..128438,
FT                   AP004380.2:129447..129724,AP004380.2:129818..130351))
FT                   /codon_start=1
FT                   /gene="P0594D10.136"
FT                   /product="putative phospho-2-dehydro-3-deoxyheptonate
FT                   aldolase 1, chloroplast precursor"
FT                   /note="contains EST(s):
FT                   AU032049(R3349),AU068686(C30692),D25146(R3349),C71840
FT                   (E0447)"
FT                   /note="contains full-length cDNA(s): AK105687,AK069968"
FT                   /db_xref="GOA:Q75W16"
FT                   /db_xref="InterPro:IPR002480"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q75W16"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="BAC10194.1"
FT                   /translation="MALATNSAAVSGGAAAAASSAPQPRLAATFLPMRRRTVSAVHAAD
FT                   PAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQEELDSVL
FT                   KTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDTFRILLQ
FT                   MGAVLMFGGQMPVVKVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFDEKSRVP
FT                   DPQRMIRAYAQSVATLNLLRAFATGGYAAMQRVTQWNLDFMDHSEQGDRYRELAHRVDE
FT                   ALGFMTAAGLTVDHPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHMLWVGE
FT                   RTRQLDGAHVEFLRGVANPLGIKVSDKMNPRDLVKLIEILNPSNKPGRITIITRMGAEN
FT                   MRVKLPHLIRAVRNSGQIVTWITDPMHGNTIKAPCGLKTRPFDSILAEVRAFFDVHDQE
FT                   GSHPGGIHLEMTGQNVTECIGGSRTVTFDDLSDRYHTHCDPRLNASQSLELAFIIAERL
FT                   RRRRMRSGVNSNLPLPPLAF"
XX
SQ   Sequence 1614 BP; 342 A; 485 C; 490 G; 297 T; 0 other; 2459988900 CRC32;
     atggcgctcg ccaccaactc cgccgctgtt tccggtggcg ctgcggccgc ggcgtcgtcg        60
     gcgccccagc cgcggctcgc cgccacgttc ctcccgatga ggaggcgaac cgtctcggcg       120
     gtccacgcgg ccgacccggc gaagagcaac gggcccgtgc aggccgcggc gaaggcctcg       180
     tccccgtcga cggtggcggc gccggagaag aagccggtgg ggttggggaa gtggacggtg       240
     gatagctgga aggcgaagaa ggcgctgcag ctgcccgagt acccgagcca ggaggagctc       300
     gactccgtgc tcaagacgat cgagacgttc ccgcccgtgg tgttcgccgg ggaggcgcgc       360
     cacctcgagg agcgcctcgc cgacgccgcc atgggccgcg ccttcgtcct ccagggcggc       420
     gactgcgccg agagcttcaa ggagttcaac gccaacaaca tccgtgacac cttccgcatc       480
     ctgctccaga tgggcgccgt cctcatgttc ggcggccaga tgcccgtcgt caaggtcggg       540
     aggatggctg gccagttcgc caagccgagg tctgattcgt tcgaggagag ggacggggtt       600
     aagctgccga gttacagggg agacaacatc aatggcgaca ccttcgacga gaagagccgc       660
     gtgccggacc cgcagcggat gatccgcgcg tacgcgcagt cggtggcaac gctcaacctg       720
     ctccgcgcct tcgccacggg agggtacgcc gccatgcagc gcgtcacgca gtggaacctc       780
     gatttcatgg atcacagcga acaaggagac aggtaccgtg aattggcaca ccgggtggat       840
     gaggcacttg gcttcatgac tgcagcaggg ctaacagtcg accatccgat aatgacaaca       900
     actgacttct ggacatccca tgagtgcctc ctcttaccat atgagcagtc tcttacacgt       960
     gaggattcca ccagtggcct cttctatgac tgctcagccc acatgctatg ggttggtgag      1020
     cgcactcgcc agctcgatgg agctcatgtt gaatttctcc gtggtgttgc caaccctctt      1080
     ggcataaagg tgagtgacaa aatgaacccc cgtgacttgg tgaagctcat tgagattttg      1140
     aacccatcaa acaagcctgg aaggataacc ataattacaa gaatgggggc agagaacatg      1200
     agggtgaaat tgcctcatct tatccgtgct gtccgcaact ctggacagat tgtcacatgg      1260
     attactgatc ccatgcatgg aaacaccatc aaggctccat gtggtctgaa gactcgtcca      1320
     ttcgattcca ttctggctga agtacgtgcg ttcttcgatg tccatgatca agaaggtagc      1380
     cacccaggag gtatccacct ggaaatgact gggcagaacg tgactgaatg catcggtgga      1440
     tcaaggaccg tcaccttcga tgacctgagc gaccgctacc acacccactg tgacccaagg      1500
     ctgaacgcgt cgcaatccct ggagctcgcc ttcatcatcg ccgagagact gaggcggagg      1560
     aggatgcggt ccggggtcaa cagcaacctg ccattgcccc cattggcttt ctaa            1614
//
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