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EBI Dbfetch

ID   BAB80524; SV 1; linear; genomic DNA; STD; PRO; 3384 BP.
XX
PA   BA000016.3
XX
DE   Clostridium perfringens str. 13 endo-beta-N-acetylglucosaminidase
XX
OS   Clostridium perfringens str. 13
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC   Clostridium.
OX   NCBI_TaxID=195102;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3384
FT                   /organism="Clostridium perfringens str. 13"
FT                   /strain="13"
FT                   /mol_type="genomic DNA"
FT   CDS             BA000016.3:1000306..1003689
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="CPE0818"
FT                   /product="endo-beta-N-acetylglucosaminidase"
FT                   /note="1127 aa, similar to gpu:AP001509_223
FT                   endo-beta-N-acetylglucosaminidase from Bacillus halodurans
FT                   (878 aa); 42.5% identity in 656 aa overlap. Putative
FT                   N-terminal signal sequence was found by PSORT"
FT                   /db_xref="GOA:Q8XM72"
FT                   /db_xref="HSSP:1BPV"
FT                   /db_xref="InterPro:IPR005201"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XM72"
FT                   /protein_id="BAB80524.1"
FT                   /translation="MRKRGIMSKRLLAVLCMASVTTSLFSFRGLEVKASPNVPYDQKES
FT                   LAPLGEVYSIETLLNWTPESDPDAKYNRASIELQDRFMGDIVNENANPEAKIMNVALTN
FT                   PYVDRAPSQGSDSMDAYVFSYWQYVNSYVYWGGSSRGIFALPTPDVVDNAHKNGVPVLA
FT                   TIGFPWGPGEGYVEQVRAFLQKDNNGNFPVADKMIEIAEYYGFDGYFFNQESYGCVKDD
FT                   ADRMVEMLEYIKKKAPNMVIGWYDSMTVDGNVKWQDALNDKNAAFFQNGENRTTDEFFL
FT                   NYNWTPEKIETTVNTAKSLGRSPFDVYAGLDVQQNAYNTPFNDDYLLDENGKLRLSLAM
FT                   YTPNSTFSMAKDVYDFYKHDQKFWVGPTGDPSKSDTEQDWTGLANYVPDRSAINDLPFV
FT                   TNFNLGHGEDYYIDGSLSRDEEWNNRAMQEYLPTWRWIVESNGSKLTPDFDFKTAYNGG
FT                   SSLKVEGKLEAANPNHIKLYSTDLNIENNSTELSIVYKTESAPNMKVGLCFGENYDEEN
FT                   FTFFDVNKNSNGEWTEVKIPLGDHVGKTISAISLKFESGQDVENFKINVGQISIEETAE
FT                   NNKGLKNSDVILEETMVHNSNSAEARIYWNGLESGNEDDLAFYEIYRIKPDGSRELMGA
FT                   TPNDAYYVQEFERYGEEMEFDIEVVPVDVNYNRGEGKRVTFNWGIPHDATQIPDKKVYE
FT                   NLALYKSVQTSAEGAAEPGLKAVDGKVDNNSKWCAAGAKDGWLTIDLGEPKNIQRWVVK
FT                   HAEAGGEAKDMNTKDFALEVSYDGGQTYQEVDVVTGNEDAITDRNLENPIVAQHLRLRI
FT                   DNSGSSPWAAIRIYEFQLYEETFTDQTTEIPMRFVNAKNNKGANDSVLFTRGKEGQTVN
FT                   LYKGLNDETPFATATIDSNGEAKFEGLDFGEDGGRVYYGTVEEGKRESLRMSAAFEGEN
FT                   WEYSKVPERFELTPYKAPGMNGENHNYGTLKINDLEAGDIVSIFNDKDSIFPEKVSVPV
FT                   AKGGDTAILDRISINPEGGVLTLEVKSEGKKARRIEVPYSGFGEIEMKIESEAPTNLRT
FT                   VDVQKKSVSLAWDSPENTYGLEGYIIYKDNKKVGEVSADETEFTVGKLNRHTIYNFKVA
FT                   AKYSNGEISKRDTITVRTAR"
XX
SQ   Sequence 3384 BP; 1299 A; 409 C; 719 G; 957 T; 0 other; 1717768879 CRC32;
     atgagaaaaa gaggcattat gagtaaacgt ttgctagcag ttttgtgcat ggcatcagta        60
     acaacatcat tatttagttt tagaggatta gaagttaagg cttcaccaaa tgtgccatat       120
     gatcaaaaag aatcattagc accattagga gaagtttata gcattgaaac tttattaaat       180
     tggacaccag aaagtgatcc agatgctaag tataatagag caagcattga gcttcaagat       240
     aggtttatgg gagacattgt aaatgaaaat gctaatccag aagctaaaat aatgaatgtt       300
     gctttaacta atccatatgt tgatagagca ccatcacaag gtagtgattc aatggatgct       360
     tatgtgttct catattggca gtatgtaaat tcatatgttt attggggagg atcaagtaga       420
     ggaatatttg cacttccaac accagacgta gttgataatg cacataaaaa tggtgttcca       480
     gttttagcta caataggatt tccatggggg ccaggagaag ggtatgttga acaagtaaga       540
     gcattccttc aaaaagataa taatggaaac ttcccagttg cagacaaaat gattgaaata       600
     gctgaatatt atggatttga tggatatttc tttaaccaag aatcctatgg ctgtgtgaaa       660
     gatgatgcag atagaatggt agaaatgctt gagtatatca aaaagaaagc tccaaatatg       720
     gttataggtt ggtatgattc tatgactgtt gatggaaatg ttaagtggca agatgcttta       780
     aatgataaga atgctgcttt cttccaaaat ggagaaaata gaacaactga cgaattcttt       840
     ttaaattata attggactcc agaaaaaata gagactacag tgaatactgc taaatcatta       900
     ggaagaagtc cttttgatgt ttatgcagga ttagatgttc aacaaaatgc atataatact       960
     ccatttaatg atgattactt attagatgag aatggaaagc ttagactttc tttagctatg      1020
     tatactccaa actcaacatt ctcaatggct aaggatgttt atgatttcta taagcatgat      1080
     caaaaattct gggtaggacc aacaggagac ccatcaaaat cagatacaga gcaagattgg      1140
     acaggattag ctaactatgt tccagataga tcagcaataa atgatttacc atttgtgaca      1200
     aactttaatt taggacatgg ggaagattat tatatagatg gttcactttc aagggatgaa      1260
     gagtggaaca atagagcaat gcaagaatat ttaccaactt ggagatggat agttgaatca      1320
     aatggttcaa aacttactcc agattttgac tttaaaactg catacaatgg aggaagttca      1380
     ttaaaggttg aaggtaagtt agaggccgca aatccaaacc acattaagtt atacagcact      1440
     gatttaaata tagagaataa ctcaacagaa ttatcaattg tttataaaac agaatcagct      1500
     ccaaacatga aagtaggatt atgttttgga gaaaattatg atgaagaaaa ctttacattc      1560
     tttgatgtaa ataaaaatag taatggagaa tggacagagg ttaaaatacc tttaggtgac      1620
     catgttggaa aaacaatttc tgcaatatca ttaaagtttg aaagtggtca agatgttgaa      1680
     aactttaaga taaatgtagg acaaatctcc atagaagaaa ctgctgaaaa taataaaggg      1740
     ttaaaaaata gtgatgttat tttagaagaa acaatggttc ataattcaaa tagtgcagag      1800
     gctagaattt actggaatgg attagaatca ggaaatgaag atgatttagc attctatgaa      1860
     atatatagaa ttaagccaga cggatctaga gagcttatgg gagcaactcc aaatgatgct      1920
     tactatgttc aagagtttga gagatatgga gaagaaatgg agtttgacat tgaagtagtt      1980
     cctgtagatg taaattataa tagaggagaa ggaaagagag taacatttaa ttggggaatt      2040
     cctcatgatg ctacacaaat tccagataaa aaggtttatg aaaaccttgc cttatataaa      2100
     tcagttcaaa ctagtgcaga aggtgctgca gaaccaggtc ttaaagccgt tgatggaaaa      2160
     gtagataata atagtaagtg gtgtgccgct ggagctaagg atggttggtt aacaattgac      2220
     ttaggagagc caaaaaatat tcaaagatgg gttgttaaac atgctgaagc tggtggagaa      2280
     gcaaaagata tgaatacaaa agattttgct ttagaagttt catatgatgg aggacaaact      2340
     tatcaagagg ttgatgttgt aactggaaat gaggatgcta ttactgatag aaatctagaa      2400
     aatccaatag ttgcacaaca tttaagactt agaattgata attcaggaag ttcaccttgg      2460
     gcagctataa gaatatacga gttccaatta tatgaggaaa catttacaga tcaaacaact      2520
     gagattccaa tgagatttgt aaatgctaaa aataataaag gggctaatga ctctgtatta      2580
     tttacaagag gtaaagaagg acaaactgtt aatctttata agggattaaa tgatgaaact      2640
     ccttttgcta cagctactat agactctaat ggagaagcta aatttgaagg attagatttt      2700
     ggtgaagatg gtggaagagt ttactatgga acagttgaag aaggtaagag agaaagttta      2760
     agaatgagtg ctgcttttga aggagaaaat tgggaatatt caaaggttcc agaaagattt      2820
     gaattaactc cttacaaggc accaggaatg aatggagaaa atcataatta tggtacttta      2880
     aaaataaatg atttagaagc tggagatatt gtaagcatat ttaatgacaa ggattcaata      2940
     ttcccagaga aggttagtgt tccagtagcc aaagggggag atacagctat tttagataga      3000
     atatctatta atccagaggg tggagtacta acattagaag ttaaatcaga aggcaagaag      3060
     gctagaagaa ttgaagttcc atattcaggt tttggagaaa tagaaatgaa aatagaaagt      3120
     gaagcaccta ctaacttaag aacagtagat gttcaaaaga agagtgtaag tcttgcttgg      3180
     gattcaccag aaaatactta tggattagaa ggatatataa tctataagga taacaagaaa      3240
     gttggagaag tttcagcaga tgaaactgaa tttacagttg gaaagttaaa cagacataca      3300
     atttataact ttaaagttgc tgctaagtat tctaatggag aaatttcaaa aagagataca      3360
     ataacagtaa gaacagctag atag                                             3384
//


  
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