spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAB80351; SV 1; linear; genomic DNA; STD; PRO; 1659 BP.
XX
PA   BA000016.3
XX
DE   Clostridium perfringens str. 13 glutamine-tRNA ligase
XX
OS   Clostridium perfringens str. 13
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC   Clostridium.
OX   NCBI_TaxID=195102;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1659
FT                   /organism="Clostridium perfringens str. 13"
FT                   /strain="13"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BA000016.3:806384..808042)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="gltX"
FT                   /product="glutamine-tRNA ligase"
FT                   /note="552 aa, similar to gpu:AE004181_5 glutaminyl-tRNA
FT                   synthetase from Vibrio cholerae (556 aa); 59.4% identity in
FT                   549 aa overlap"
FT                   /note="CPE0645"
FT                   /db_xref="GOA:Q8XMP3"
FT                   /db_xref="HSSP:1NYL"
FT                   /db_xref="InterPro:IPR020056"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8XMP3"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="BAB80351.1"
FT                   /translation="MSNAEHSSNFIRNIIIDDLDSKKHDTIITRFPPEPNGYLHIGHAK
FT                   SIVLNFELGKEFNGRTNLRFDDTNPTKEDTEYVESIKEDVHWLGYNWSELHFASNYFDE
FT                   MYKRALLLIKKGKAYVCDLTPEEIKEYRGTLTEPGKESPYRNRSIEENLDLFERMRKGE
FT                   FEDGSKVLRAKIDMSSPNINFRDPIIYRIAHASHHNTGDKWCIYPMYDFAHPLEDAIEG
FT                   ITHSICTLEFADHRPLYDWFVKECEMESVPRQIEFARLNITNTVMSKRKLKQLVDEGIV
FT                   DGWDDPRMPTVAGLRRRGYTPKSIRNFCKAIGVAKADSTVDSQMLEHFIREDLQETAPR
FT                   AMAVINPLKLVITNYPEGESEILEIENNPKDESAGKRAVTFSREVYIEREDFMENPPKK
FT                   YFRLFPGNEVRLKGAYFVKCNEVIKDENGEVTEIHCTYDPETKSGTGFTGRKVKGTIHW
FT                   VDANNCIPAEFRLYEPLILDDCEENEGKHFLEQINPNSLTICKGFIEPSAKDAKPQDKY
FT                   QLFRHGYFNVDPNFTSDDNLVFNRIVSLKSSFKLK"
XX
SQ   Sequence 1659 BP; 645 A; 224 C; 299 G; 491 T; 0 other; 1430434640 CRC32;
     atgtcaaatg ctgagcactc atcaaacttt ataagaaata taataataga tgatttagat        60
     agcaaaaaac atgatacaat aataactcgt tttccacctg aacctaatgg atatttacat       120
     ataggtcatg caaagtctat agttttaaac tttgaattag gaaaagagtt taacggaaga       180
     actaacctaa gatttgatga tacaaatcca actaaagagg atactgaata cgttgaatct       240
     attaaagaag atgttcattg gttaggttat aactggagcg aattacattt tgcatcaaac       300
     tactttgatg aaatgtataa aagagctcta cttttaatta aaaaaggtaa agcttatgtt       360
     tgtgatttaa ctccagaaga aataaaagaa tatagaggta ctcttactga gcctggtaag       420
     gaaagtccat atagaaatag atcaattgaa gaaaacttag atctatttga aagaatgaga       480
     aaaggtgaat ttgaggacgg ttcaaaagtt ttaagagcta aaatagatat gagctcacct       540
     aacataaact ttagagatcc tataatttat agaattgctc atgctagtca ccataataca       600
     ggtgataaat ggtgtatcta ccctatgtat gactttgctc atccattaga agatgctatt       660
     gaaggaataa ctcactctat ttgtacttta gaatttgctg atcacagacc attatatgat       720
     tggttcgtta aagaatgtga aatggaaagt gttccaagac aaattgagtt tgcaagactt       780
     aatatcacaa acactgttat gagtaaaaga aagttaaagc aattagttga tgaaggcata       840
     gttgatggtt gggatgaccc aagaatgcct actgttgctg gacttagaag aagaggttat       900
     actcctaagt caataagaaa cttctgtaaa gctataggag ttgctaaggc agattctact       960
     gttgattctc aaatgcttga gcatttcata agagaagacc ttcaagaaac tgctccaaga      1020
     gctatggctg ttataaatcc acttaaatta gttataacaa actatcctga aggagaatca      1080
     gaaattcttg aaatagaaaa taatcctaaa gatgaatcag ctggtaaaag agctgttaca      1140
     ttctcaagag aagtttatat tgaaagagaa gatttcatgg aaaatcctcc aaagaaatat      1200
     ttcagattat tcccaggaaa cgaagtaaga ttaaaaggtg cttattttgt aaaatgtaac      1260
     gaagtaataa aagatgaaaa tggggaagtt acagaaattc actgtactta tgacccagaa      1320
     actaagagtg gaactggatt tactggaaga aaagttaaag gaacaatcca ctgggttgat      1380
     gctaataact gtattcctgc tgaatttaga ttatatgaac cattaatctt agatgattgt      1440
     gaagaaaatg aaggaaagca cttccttgag caaataaatc ctaactcatt aactatatgt      1500
     aagggattca ttgaaccaag cgctaaagat gctaaacctc aagataaata tcaattattt      1560
     agacatggtt acttcaatgt tgatcctaat ttcacaagtg atgataattt agtattcaac      1620
     agaatagttt cattaaagag ttcatttaaa ttaaaataa                             1659
//
spacer
spacer