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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAB17021; SV 1; linear; genomic DNA; STD; PLN; 1798 BP.
XX
PA   AP002040.1
XX
DE   Arabidopsis thaliana (thale cress) partial ubiquitin carboxyl-terminal
DE   hydrolase-like protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1798
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="3"
FT                   /ecotype="Columbia"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="Mitsui P1"
FT                   /clone="MEC18"
FT   CDS             complement(join(AP002040.1:<1..64,AP002040.1:155..235,
FT                   AP002040.1:313..459,AP002040.1:543..621,
FT                   AP002040.1:1001..1075,AP002040.1:1350..1459,
FT                   AP002040.1:1552..1650,AP002040.1:1938..2053,
FT                   AP002040.1:2162..2270,AP002040.1:2348..2566,
FT                   AP002040.1:2668..2933,AP002040.1:3252..3409,
FT                   AP002040.1:3512..3662,AP002040.1:3862..3928,
FT                   AP002040.1:4171..4227))
FT                   /codon_start=1
FT                   /product="ubiquitin carboxyl-terminal hydrolase-like
FT                   protein"
FT                   /note="gene_id:MEC18.1"
FT                   /db_xref="GOA:Q84WU2"
FT                   /db_xref="HSSP:1NBF"
FT                   /db_xref="InterPro:IPR013322"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q84WU2"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="BAB17021.1"
FT                   /translation="MTMMTPPPLDVISDYPIIVQQEDEEMLVPNPDLVEGPQPMEVAQT
FT                   DPAATAVENPPPEDPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVD
FT                   HLSMYLDVADAANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFM
FT                   PLSELYEPTRGYLVNDTVLIEAEVAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLL
FT                   QTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDT
FT                   YDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKES
FT                   FYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHDLQDAKKGVLFIDFPPVLQLQ
FT                   LKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGRYLSPDADKSVRNLYTLHSVLVHSGG
FT                   VHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPQNNPGFNNPPFKF
FT                   TKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDKRKYKAQAHLFTT
FT                   IKVARDDDITEQIGKNIYFDLVD"
XX
SQ   Sequence 1798 BP; 568 A; 343 C; 405 G; 482 T; 0 other; 3687143915 CRC32;
     atgactatga tgactccgcc gccgctagat gtaatctccg attatcctat tattgttcag        60
     caggaagacg aggagatgct tgttccgaat ccggatttgg tcgagggacc tcagcctatg       120
     gaagttgccc aaactgatcc tgctgctacc gctgtggaga atccaccacc cgaggatcct       180
     ccaagtctga aattcacgtg gaccatccca atgttcacta ggctcaatac caggaagcat       240
     tactctgacg tatttgttgt aggcggttat aagtggcgta tattgatttt tcccaaagga       300
     aacaatgtcg accatttgtc aatgtacttg gatgttgctg atgctgcgaa tttgccgtac       360
     gggtggagca gatattcaca gttcagtctg gctgtagtga atcaagtcaa caaccgatat       420
     tccatcagaa aggagacgca acatcaattc aatgcaagag aaagcgactg ggggtttaca       480
     tcattcatgc ctctcagcga gctctatgaa cccactcgag gatatttagt gaatgacact       540
     gttctgattg aagctgaagt tgctgtgcgt aaagttcttg attattggtc atatgactca       600
     aaaaaagaga caggttttgt tggactaaaa aaccaaggtg ctacctgtta catgaattct       660
     ctcctgcaga ctttatacca cataccttac tttagaaagg ctgtttacca catgccaacg       720
     actgaaaatg atgcacctac cgctagtatc ccattggcgc tccagagttt attttacaag       780
     cttcagtata atgataccag tgtagcgaca aaggagctga caaagtcgtt tggttgggat       840
     acatatgatt cttttatgca acatgatgta caagaactca acagagttct ctgtgaaaag       900
     cttgaggaca agatgaaggg aactgttgtg gagggaacaa tacaaaagct atttgaaggt       960
     caccacatga attacattga gtgcattaat gtagattaca aatctacacg gaaagagtca      1020
     ttttatgacc tccagcttga tgttaaaggc tgcaaagatg tatatgcttc ttttgacaag      1080
     tatgttgaag ttgaacgcct tgaaggagac aacaaatacc atgcagaagg acatgatttg      1140
     caggatgcaa aaaaaggtgt tctattcata gactttccac cagttcttca acttcagctc      1200
     aagaggtttg aatacgattt tatgagggac acaatggtga agattaatga tcggtatgag      1260
     tttcctctcc aactggatct cgacagagaa gatggaagat atttatcccc tgatgcagac      1320
     aagagtgtcc gcaatctcta caccctccac agtgtcttgg ttcacagtgg aggagtgcat      1380
     ggagggcatt attatgcttt tattaggcca acactttcag atcagtggta taaatttgac      1440
     gatgaacggg tcacgaaaga agatgtcaaa agagcactgg aagagcaata tggtggtgaa      1500
     gaagagttac cgcagaataa tcctggtttc aataatccac ctttcaaatt cacaaaatac      1560
     tcgaatgcat acatgcttgt ttatattcgg gaaagtgaca aggataagat aatctgcaac      1620
     gttgatgaga aagacattgc ggaacatttg cgggtgaggc tgaaaaaaga acaagaagaa      1680
     aaggaagata aaagaaaata caaggctcaa gctcaccttt tcacgacaat caaggtcgca      1740
     agagatgatg acatcactga gcaaattgga aagaatatat attttgatct tgttgatc        1798
//
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