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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAB10787; SV 1; linear; genomic DNA; STD; PLN; 1611 BP.
XX
PA   AB028613.1
XX
DE   Arabidopsis thaliana (thale cress) hypothetical protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1611
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /ecotype="Columbia"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="Mitsui P1"
FT                   /clone="MGG23"
FT   CDS             complement(join(AB028613.1:3444..3809,
FT                   AB028613.1:3894..3993,AB028613.1:4102..4227,
FT                   AB028613.1:4319..4508,AB028613.1:4604..4834,
FT                   AB028613.1:4925..5073,AB028613.1:5288..5508,
FT                   AB028613.1:6023..6250))
FT                   /codon_start=1
FT                   /note="contains similarity to heparanase"
FT                   /note="gene_id:MGG23.2"
FT                   /db_xref="GOA:Q9FZP1"
FT                   /db_xref="InterPro:IPR005199"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9FZP1"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="BAB10787.1"
FT                   /translation="MAYRQILAIVLFLCVFQFLDCTVSSAVEENGTVFVYGRAAVGTID
FT                   EDFICATLDWWPPEKCDYGSCSWDHASILNLDLTIVVPISKNTAFAPLKIRIGGTLQDI
FT                   VIYETPDSKQPCLPFTKNSSILFGYTQGCLPMRRWDELNAFFRKTGTKVIFGLNALSGR
FT                   SIKSNGEAIGAWNYTNAESFIRFTAENNYTIDGWELGNELCGSGVGARVGANQYAIDTI
FT                   NLRNIVNRVYKNVSPMPLVIGPGGFFEVDWFTEYLNKAENSLNATTRHIYDLGPGVDEH
FT                   LIEKILNPSYLDQEAKSFRSLKNIIKNSSTKAVAWVGESGGAYNSGRNLVSNAFVYSFW
FT                   YLDQLGMASLYDTKTYCRQSLIGGNYGLLNTTNFTPNPDYYSALIWRQLMGRKALFTTF
FT                   SGTKKIRSYTHCARQSKGITVLLMNLDNTTTVVAKVELNNSFSLRHTKHMKSYKRASSQ
FT                   LFGGPNGVIQREEYHLTAKDGNLHSQTMLLNGNALQVNSMGDLPPIEPIHINSTEPITI
FT                   APYSIVFVHMRNVVVPACA"
XX
SQ   Sequence 1611 BP; 481 A; 334 C; 358 G; 438 T; 0 other; 3979365483 CRC32;
     atggcttatc gtcaaatttt ggccatagtt ttgtttcttt gtgtgtttca attcttggac        60
     tgcactgtta gctccgccgt agaagagaat gggactgtgt ttgtgtacgg aagagccgcc       120
     gttggaacaa tagatgaaga cttcatttgc gccaccttag actggtggcc accggagaaa       180
     tgtgactacg gcagttgtag ttgggaccat gcttcaattc tcaatctgga tttgaccatt       240
     gttgttccaa tttccaaaaa cacagcattt gctccgttga aaataagaat aggaggaaca       300
     ttacaagaca tagtgatata tgagacacca gattcgaagc aaccatgtct tccttttacc       360
     aaaaactctt caattctttt tggttacaca caaggatgtc tacctatgcg tcgatgggac       420
     gagctcaatg ccttctttcg caaaaccgga actaaagtca tcttcgggct gaatgcactt       480
     tctggacgtt ccataaaatc taacggtgaa gccataggag cctggaatta caccaatgct       540
     gaatcgttca tccggtttac agcagagaac aattacacca tcgacgggtg ggagctcggc       600
     aatgagctgt gtggaagtgg tgttggtgca cgagttggtg caaatcaata tgctatagac       660
     accataaatc tgcgaaacat tgtgaaccgg gtttacaaga atgtgagtcc catgccgttg       720
     gtgataggtc cgggtggctt ctttgaagtt gattggttca cagaatacct gaacaaagca       780
     gaaaactctc tcaatgctac tactcgacat atctacgatc tcggtccagg agtcgatgaa       840
     catctgatag aaaagattct aaacccttca tatctggacc aagaggcaaa aagttttcgc       900
     agtctcaaga acataatcaa aaactcctca acaaaggctg tggcatgggt tggtgagtcc       960
     ggtggtgcct acaacagtgg gcggaatctt gtctctaatg ctttcgtgta tagtttctgg      1020
     tacctggacc agcttggtat ggcatcgctt tatgatacaa aaacatactg tagacagtct      1080
     ctgatcggag gaaactatgg gctgctaaat actactaact tcacaccaaa tccagactat      1140
     tacagtgctc tgatctggcg acaacttatg ggaagaaagg cattgttcac aaccttttcc      1200
     ggaaccaaaa agatacgttc gtacacccat tgtgcaagac aatcgaaagg gatcacagtt      1260
     ttactgatga accttgacaa tactacaacg gttgtagcga aagtagagtt aaataacagt      1320
     ttcagtctga gacatacaaa gcacatgaag tcttataaaa gagcaagttc ccaacttttt      1380
     gggggtccta atggagtaat ccaaagagaa gagtaccatt tgacagcaaa ggatggaaac      1440
     ctacacagtc agactatgct actcaacgga aatgctcttc aggttaattc gatgggtgat      1500
     ttacctccta tagagccgat acatataaat tcaacagagc caataacaat agctccatat      1560
     tccattgtgt ttgtgcatat gcggaatgtt gttgtacctg catgtgctta a               1611
//
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