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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAB10313; SV 1; linear; genomic DNA; STD; PLN; 1182 BP.
XX
PA   AB017061.1
XX
DE   Arabidopsis thaliana (thale cress) pectate lyase
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1182
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /ecotype="Columbia"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="Mitsui TAC"
FT                   /clone="K19E20"
FT   CDS             join(AB017061.1:1745..1821,AB017061.1:3560..4202,
FT                   AB017061.1:4287..4390,AB017061.1:4470..4634,
FT                   AB017061.1:4781..4973)
FT                   /codon_start=1
FT                   /product="pectate lyase"
FT                   /note="gene_id:K19E20.1"
FT                   /db_xref="GOA:Q93WF1"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q93WF1"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="BAB10313.1"
FT                   /translation="MTSRSNETWHEHAVENPEEVAAMVDMSIRNSTARRRLGYFSCSTG
FT                   NPIDDCWRCDRRWQSRRKHLANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLR
FT                   HAVIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIH
FT                   GIHIHDCRPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAV
FT                   MASTAITISNNYFTHHNEVMLLGHSDTYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYF
FT                   HVVNNDYTHWEMYAIGGSASPTINSQGNRYLAPRNRFAKEVLSRVRSTRQWRHWNWRSE
FT                   GDLFLNGAFFTRSGSGLGASYARASSLAAKSSSLVGVITYNAGALNCRGGRRC"
XX
SQ   Sequence 1182 BP; 344 A; 226 C; 284 G; 328 T; 0 other; 29314291 CRC32;
     atgacttcca ggtctaatga aacatggcat gaacatgcag ttgagaatcc agaggaagta        60
     gctgccatgg tggacatgag cattcgaaac agcacagcga gaagaagatt aggatacttc       120
     tcatgctcaa ccggaaatcc aatcgatgat tgttggcgtt gtgaccggag atggcaatcc       180
     cggcgaaaac atctagccaa ttgcgcaatc gggttcggtc gcaatgcaat cggcggtaga       240
     gacggtcgtt actacgtagt gagtgatcca aacgacgata acccggttaa ccctaaaccg       300
     ggaacattac gtcacgcagt aattcaagaa gaaccattat ggatcgtctt taaacgtgac       360
     atggtcataa cattaaaaga agaactaatc atgaacagtt tcaaaacaat cgatggtcgt       420
     ggcgtcaacg ttcacatagc taatggtgca tgcatcacga ttcagttcgt gactaacatt       480
     atcattcatg ggatacatat tcatgattgt agaccaactg gtaacgctat ggttagaagc       540
     tctccttcgc attatggttg gagaactatg gctgatggag atgggatttc gattttcggg       600
     tcgagtcata tttggattga tcataattcg ctttcgaatt gtgctgatgg gcttattgat       660
     gctgttatgg cttctactgc tattactatc tccaataatt acttcacaca ccacaatgag       720
     gttatgttat tgggacatag tgatacctat acaagggata aggttatgca agttacaata       780
     gcttataatc attttggtga aggtcttatt cagagaatgc cgaggtgtag gcatggatat       840
     tttcatgtag ttaacaatga ctatacacat tgggaaatgt atgcgatcgg tggcagtgcg       900
     agtcctacca ttaacagcca aggaaataga tatctcgccc caagaaaccg gtttgctaaa       960
     gaggtacttt caagagttag gtcgactagg caatggaggc attggaattg gagatcagaa      1020
     ggagatcttt ttttaaacgg agctttcttc acacgttctg gatcaggtct tggagctagc      1080
     tacgctagag cttcaagttt agcagccaaa tcatcatctc ttgttggcgt cattacctac      1140
     aatgccggtg ctcttaattg cagaggtggt cgccggtgtt aa                         1182
//
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