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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BAB08802; SV 1; linear; genomic DNA; STD; PLN; 1419 BP.
XX
PA   AB011482.1
XX
DE   Arabidopsis thaliana (thale cress) xylose isomerase
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1419
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /ecotype="Columbia"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="Mitsui P1"
FT                   /clone="MUA2"
FT   CDS             join(AB011482.1:77971..78030,AB011482.1:78135..78239,
FT                   AB011482.1:78348..78422,AB011482.1:78534..78663,
FT                   AB011482.1:78748..78839,AB011482.1:79057..79110,
FT                   AB011482.1:79314..79599,AB011482.1:79677..79910,
FT                   AB011482.1:79996..80066,AB011482.1:80164..80204,
FT                   AB011482.1:80294..80393,AB011482.1:80472..80642)
FT                   /codon_start=1
FT                   /product="xylose isomerase"
FT                   /note="gene_id:MUA2.25"
FT                   /db_xref="GOA:Q9FKK7"
FT                   /db_xref="HSSP:1A0E"
FT                   /db_xref="InterPro:IPR018115"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9FKK7"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="BAB08802.1"
FT                   /translation="MKKVEFFMLLLCFIAASSLVSADPPTCPADLGGKCSDSDDWQGDF
FT                   FPEIPKIKYEGPSSKNPLAYRWYNAEEEILGKKMKDWFRFSVAFWHTFRGTGGDPFGAA
FT                   TKYWPWEDGTNSVSMAKRRMRANFEFLKKLGVDWWCFHDRDIAPDGTTLEESNKNLDEV
FT                   IELAKELQKGSKIKPLWGTAQLFLHPRYMHGGATSSEVGVYAYAAAQVKKAMEVTHYLG
FT                   GENYVFWGGREGYQTLLNTDMGRELDHLARFFEAAVAYKKKIGFKGTLLIEPKPQEPTK
FT                   HQYDWDAATAANFLRKYGLIDEFKLNIECNHATLSGHTCHHELETARINGLLGNIDANT
FT                   GDAQTGWDTDQFLTDVGEATMVMMSVIKNGGIAPGGFNFDAKLRRESTDVEDLFIAHIS
FT                   GMDTMARGLRNAVKILEEGSLSELVRKRYATWDSELGKQIEEGKADFEYLEKKAKEFGE
FT                   PKVSSAKQVQVSCY"
XX
SQ   Sequence 1419 BP; 411 A; 254 C; 366 G; 388 T; 0 other; 2973920300 CRC32;
     atgaagaaag ttgagttttt tatgctcctt ctctgcttca tcgcagcgtc atctctagtg        60
     tctgctgatc caccaacatg tcctgctgat ttgggaggca agtgtagtga ttctgatgac       120
     tggcaaggtg atttcttccc tgaaatcccc aagattaagt atgagggacc ttcgagtaag       180
     aacccacttg cttacaggtg gtataacgct gaagaagaga ttcttgggaa gaaaatgaag       240
     gattggttta gattcagtgt tgcgttttgg catactttcc gtgggactgg aggtgatcca       300
     tttggtgctg ctactaagta ttggccttgg gaagatggta ctaactctgt gtctatggct       360
     aagagaagaa tgagagctaa ctttgagttc ttgaagaaac ttggagttga ttggtggtgt       420
     tttcatgaca gagacatagc acctgatggc actacacttg aggaatctaa caaaaacttg       480
     gatgaagtta tcgaactcgc caaagaactc caaaagggga gcaaaatcaa accattgtgg       540
     ggaacagctc agcttttctt gcatcctcgt tatatgcacg gaggagcgac cagctctgaa       600
     gttggagtgt atgcttacgc tgctgctcag gtgaagaaag ccatggaggt aacacattac       660
     ttaggtggtg aaaactacgt tttttggggt ggtcgtgaag gttatcagac actcttgaac       720
     actgatatgg gaagagagct tgatcatcta gccaggttct ttgaagctgc tgttgcttac       780
     aagaagaaga ttggattcaa aggcacgctt ttaatcgagc ccaagcctca agaacccacc       840
     aagcaccagt atgactggga tgctgcaaca gctgccaatt tcttgaggaa atatggtctt       900
     attgatgagt ttaagctcaa cattgagtgt aaccatgcca cgctctctgg tcacacttgt       960
     catcacgagc ttgaaactgc aagaattaat ggtttacttg gcaacattga tgcaaacact      1020
     ggcgatgctc aaactggatg ggatacagat cagtttctta cagatgttgg agaagcaacc      1080
     atggttatga tgagtgtcat caaaaatggt gggattgctc caggcggctt caactttgac      1140
     gctaaactgc gaagagagag tacagacgtg gaagacttat tcattgctca tattagtgga      1200
     atggatacaa tggctcgtgg actgagaaat gcagtcaaaa tcttggagga gggaagtcta      1260
     agtgaattgg tacgcaagcg atatgcaact tgggactctg agcttgggaa gcaaatagaa      1320
     gaaggaaaag ctgattttga gtatcttgag aagaaagcta aagagtttgg agaaccaaag      1380
     gtttcttctg ctaaacaggt acaagtttct tgctattaa                             1419
//
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