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EBI DbfetchID BAA25160; SV 1; linear; genomic RNA; STD; VRL; 5904 BP. XX PA AB011257.1 XX DE Rice yellow stunt virus large protein XX OS Rice yellow stunt virus OC Viruses; ssRNA negative-strand viruses; Mononegavirales; Rhabdoviridae; OC Nucleorhabdovirus. OX NCBI_TaxID=59380; XX FH Key Location/Qualifiers FH FT source 1..5904 FT /organism="Rice yellow stunt virus" FT /mol_type="genomic RNA" FT CDS AB011257.1:7895..13798 FT /codon_start=1 FT /gene="L" FT /product="large protein" FT /note="probable RNA-dependent RNA polymerase" FT /db_xref="GOA:O10378" FT /db_xref="InterPro:IPR001016" FT /db_xref="UniProtKB/Swiss-Prot:O10378" FT /func_characterised="identical sequence" FT /protein_id="BAA25160.1" FT /translation="MDDEGHGYWQDYDEDESWLDAENDVFDDDIFEEAEDNEHLVEGGD FT FHLKSALRGEADMLTNPIYEKEREKLQEDVGDLGVALGHLNVRPFLEKMGERISTDHTN FT TPLIENIKQGGFGAIHHMKSTARLIVAEAATVTETMLTSGVDTTLAGAYHFFEQNHPHM FT KCTVNMVLMFLTILNNVKNIRLNVDLHQILKNNISIKGSTVCMYITVATVAYFSTDIVV FT FDIDGQKYNTPKTYFLNACDKIQERFNVILYSYLAEGLSIPGSPPTYIVNRIIDWGDSI FT LYQMGNDGYDVIALYEATVVGVILSRDDKDLSPTSGGGDFLENIQQDLGPVQQNHIRYL FT IALLHDMTPHQLADLHGLYRIWAHPIIDIDGGVKKLQKVTQSLKGDINSKPESQETVRS FT FRRLFVMDYFVKHQFYPPITLPEKSNCYIGNCIRTSKKIDESHINYNFSDWDLVELGGA FT FSIPYSWNVLHLAKDKAISPTRSEMYTMLCKTKRVFNAELRRGVLKLMNTTLTPLREFL FT TEVAEHGLDIDDCIIGLFPKERELKIMARFFALLSFKMRLYFTATEELLGSKLLRYFPQ FT ITMSSNLLDMQEKMSSMSRDLESQNKSVTYVINMDFVKWNQQMRESTCEGFLKNWSKLF FT GLPGLYSRSHQIFRDSILYIADGTRDLTPDPDTGIMVDNNVCWIDDGAGKEGIRQKAWT FT IMTVCDIAAVARHHPGVFHLVGGGDNQVLTVTYHTNQIDTDGNITEEGKSKIKAKVKKF FT IEALETHFAARGLPLKTSETWCSTSLFMYNKFMYYKGVPLRSPLKQVSRLFPYSNNTSM FT TLQSMAQCLGTGLRSAAQKEVSHIALLFMRNIWGSVLGWIILYCHPMLPSISSETCNSG FT VSTIVRGRKAINMKTHRIDLVALILKILYLPGQLGGPGLVNIYQMTMRGFPDPVTEAIC FT FLRKFKNYLICVGSSYSSHLARMAGVSFSASRSYEPLIEDVCSLNLDTPRSGTGGKREV FT PRKILLKSRLGGNQHLKELLGIMKGPSEGEFYRAISSGKVLDVRVMHEITSSTLYAVTN FT TFTSRVDKTATLKRLTFKFSMLESLADAELKYIRYLSVRDDKTHDIMFDGCSRIIADEC FT RTKGWGKPVLGVTVPTPFEYLQISWTDEHICDNNHITVRISNQDRQVTTETLGPCKPYL FT GAYTKEKFKMTEVAAAYGDEDVLSKSLRILKIINWRYQDGSTMSEIIKAPFRAVTDIDP FT QRMVQESTVTKGDYDHRRKMDARVHGGIPNFVTTPLSHISISTSTWYKHARGKNENIHF FT QACIIQTMYQIIIRTMSNIHSQEKLHVHECCQTSISEIQEPRANLDLTTPQMIPTFPTL FT MGNPLVYIPEQSITFDYSRTQEVDYSRRVGSLDCQRSTDYGWVDAYSSLSWLIMCDVIG FT WTKMPDSFYIMQQERVDHYLLSMYIISIWKVLKSEFDLHKTMLDWGPLLKVYSSDTGVQ FT VLSQSMGIVVLGKLEGGLSVNMMDICNSLTGLTSNQIPPFSVNLALPRIHKQVATWWKL FT TCSDTMYCIQCSNILKGYWEGTLINTRIDNDLRCSECADGGISPRIVNAHISNLSDHLI FT KIIPDREEVQLPLLAGGEDLNNLEVVLSLEDEWPDSDDITILNRIGEMNDIDGRMKNYL FT EVMALLNPDVVIIRPEILELEILRRVCEVVRLASEGKLIIHILVEEPSYLESGAIYEME FT RAFPRHNLFHVQFSFRKPPEGLHKLWLLPQDITLARADVGDWLVIPFTQLLDFHDTITP FT DTRLHHQREAIRQDVFWSTKEQGGLGLVVLQHICTKTELSYRLDRSKVDVEINKMMIKD FT PVMGGKYVILKRRCSWAIFSTKYELLCSAERIKGNLSADGKKITSKDFSRTYKEDIIIF FT IISVLMRSLDCDEKRVMTLSYVECLPELLTLKPRFNKSGVISVRYLDYFWFFKRVYSYN FT NPEVAIPYSAVIKGVNLGSPRKEGYSLASSDGAP" XX SQ Sequence 5904 BP; 1847 A; 1114 C; 1413 G; 1530 T; 0 other; 2001150073 CRC32; atggatgatg aggggcatgg ttattggcag gattatgatg aggatgagag ttggttggat 60 gctgagaatg atgtgtttga tgatgatatc tttgaggaag cggaagacaa tgagcatctg 120 gtggaagggg gagactttca tttaaaatca gctctccgag gagaggctga catgctgaca 180 aatcctatat atgagaagga aagagaaaaa ctgcaggaag atgtgggaga tctcggggtt 240 gctctaggtc acctgaatgt ccgacccttt cttgagaaaa tgggtgagcg catctcaacc 300 gatcacacaa acactccctt aattgaaaac ataaaacagg gaggatttgg ggcaattcac 360 catatgaaga gtactgccag gctcattgtg gcagaggcag caactgtcac agagacaatg 420 ctgactagtg gagttgatac cactctcgca ggtgcatatc acttctttga gcaaaaccat 480 cctcatatga aatgtactgt taatatggtg ctaatgttcc tgaccattct gaataatgta 540 aagaatatca gattgaatgt agatctccat cagatattga aaaataacat atctattaaa 600 ggaagcactg tatgcatgta tattactgtt gctactgtag catacttttc tactgatata 660 gttgtatttg acattgatgg ccagaaatac aatacaccga agacgtattt cttgaatgct 720 tgtgataaga tacaagagag gtttaatgtc atactctact catatcttgc tgaaggttta 780 tctatacccg ggtcccctcc aacatatata gtcaatcgaa tcatagattg gggtgattca 840 atattgtacc aaatgggcaa tgatgggtat gatgtcattg cgttgtatga ggcaactgtt 900 gttggggtga tattgtccag agatgacaaa gacctgtctc ctacatctgg ggggggagac 960 ttccttgaaa acatccagca ggatcttggg cctgtccaac agaaccatat acgttatttg 1020 atagcattgt tacatgatat gacccctcac cagcttgcag acctacatgg gctttatcgc 1080 atctgggcgc atccaatcat agacatagac ggtggagtta agaaactgca gaaggttaca 1140 cagagcctta aaggtgatat taattcgaag cctgagagtc aagaaactgt gcgctccttc 1200 aggagattgt ttgtgatgga ctattttgta aagcaccagt tctatcctcc tattacactg 1260 cctgagaaga gtaactgcta tataggcaac tgcataagaa caagtaagaa gatagacgag 1320 agccacatca attataattt cagtgactgg gatctagtag agctgggtgg agccttctcc 1380 attccatact catggaatgt tctacatcta gctaaagaca aagcaatatc accgacaaga 1440 tcagagatgt atacaatgct atgcaagaca aaacgggtat ttaatgctga attacggcgt 1500 ggagtcctta aattgatgaa tacaacccta actcctctaa gggaattcct aactgaagtc 1560 gcagagcatg ggctggatat agatgattgc ataataggat tatttcccaa ggagagagaa 1620 ttaaagatta tggcaagatt ttttgctctg ttgtctttca aaatgaggct atattttact 1680 gctactgaag agcttctagg cagcaagcta ttgagatact tccctcagat tacaatgagc 1740 tctaatttgc tcgacatgca agaaaagatg tcaagcatgt ccagagatct agagtcgcag 1800 aataaatcag tgacatatgt cataaatatg gattttgtca agtggaacca gcagatgaga 1860 gagtccacat gtgaagggtt tttaaagaat tggagcaaat tgttcggact tccagggcta 1920 tattctagat ctcatcagat tttccgagac agcatactat acatagctga tggaaccagg 1980 gatctaacac cggatcctga cacaggaatc atggtagaca acaatgtctg ctggatagat 2040 gacggggcgg gaaaagaagg tataaggcaa aaagcctgga ctataatgac tgtatgtgac 2100 atagcagcag tggccaggca tcacccaggg gtgtttcatc ttgttggggg aggagacaat 2160 caagtgctca cagtgaccta tcataccaat caaatagaca cagatggaaa tataactgag 2220 gagggaaaaa gcaagatcaa agccaaagtg aagaaattta ttgaagctct ggagacacat 2280 ttcgctgctc gggggctgcc attgaagaca tccgagacat ggtgcagtac ttcattattt 2340 atgtacaaca agtttatgta ctataagggt gtaccattga gatcaccctt aaaacaggta 2400 tctagattgt tcccttattc taacaataca tccatgacac ttcaatctat ggctcaatgt 2460 ttgggcaccg gactacgatc agccgcccag aaggaagtga gtcatattgc cctactgttc 2520 atgagaaaca tatgggggtc tgtcctgggg tggattatac tgtattgcca ccctatgttg 2580 cccagcatct ctagtgaaac ctgcaatagt ggagtgagca ctatagttag aggacgaaaa 2640 gccatcaaca tgaagactca tcggattgac ttggttgctc ttatattgaa gatattatat 2700 ttgccaggac aacttggtgg gccaggactt gttaatatat atcagatgac tatgagagga 2760 tttccagacc cagtgactga agctatttgc tttttgagga agttcaagaa ctatctgatc 2820 tgtgtaggat ccagttacag ttctcatcta gctagaatgg cgggtgtatc cttctcagcc 2880 agtcgaagct acgagccatt gatagaagat gtttgcagcc tcaatctgga tacccccaga 2940 tcaggaacgg gggggaagag agaagttcca agaaagatat tactaaaatc aagactaggg 3000 ggcaatcagc atttaaaaga gcttctcggg atcatgaagg gtccaagtga aggtgagttt 3060 tacagagcaa tatcttcagg gaaggtactt gatgtgaggg tgatgcatga aataacaagc 3120 agcaccttgt atgctgtaac gaataccttc acgtcccgtg tggacaagac agcaacccta 3180 aagaggctca ccttcaaatt ctctatgcta gagtctcttg cagatgcaga attgaagtat 3240 atcagatatt tgtctgtcag agatgacaag acacacgata ttatgtttga tggctgcagc 3300 agaataatcg ctgatgagtg caggacaaag ggctggggga agcctgtgct gggtgtcaca 3360 gtacctactc cttttgagta cttacaaata tcttggactg acgaacatat ctgtgacaac 3420 aatcacataa cggtgaggat atctaatcaa gacagacagg tgacaacaga aaccctgggt 3480 ccatgcaagc cttatctagg tgcttataca aaagagaaat tcaaaatgac agaggttgca 3540 gcagcatacg gtgatgagga tgtcctgtca aaatccttaa gaatcctgaa gataattaac 3600 tggaggtacc aagacggctc aactatgagt gagatcatta aagcaccttt ccgagctgtg 3660 acggacattg atcctcaaag aatggtgcaa gagagtacag taacaaaggg agactatgat 3720 cacagaagaa agatggatgc tagagttcat ggaggaatac caaactttgt cactacacca 3780 ttatcacata ttagtatatc taccagtaca tggtacaagc acgccagggg aaagaatgag 3840 aatatacatt tccaagcatg catcatccag acaatgtatc agataatcat aaggaccatg 3900 agcaacatac acagtcaaga gaagttacac gtacatgagt gctgccagac ctcgatatcg 3960 gagatacaag agccaagagc aaatcttgat ctaacaacac cccagatgat tccgaccttc 4020 cccaccttga tgggaaatcc tctggtatac atacctgagc agtccatcac atttgattac 4080 tcacgaactc aagaggttga ttactcaagg agagtgggat cactagattg ccaaaggtca 4140 acagattatg gatgggtaga tgcttacagc tcattatcct ggctgataat gtgtgatgtg 4200 attggttgga ccaaaatgcc tgattctttt tacatcatgc aacaggagag agtggatcac 4260 tacttattat caatgtatat tatttccata tggaaggtgc tgaagagtga atttgacctg 4320 cacaaaacca tgttggattg ggggccttta ttgaaagtgt actcatcaga cacaggagtg 4380 caagttttga gtcaatcaat ggggatagtt gtgttgggaa aattggaagg gggcctgtcg 4440 gtgaacatga tggatatatg caattccctg acaggactga ctagcaatca gatacctcca 4500 ttctctgtaa acctggcact gcctagaata cacaagcagg tagctacatg gtggaaatta 4560 acatgcagtg atactatgta ctgtatacag tgttccaaca ttctaaaggg ttactgggag 4620 gggacattaa taaatacaag aatagacaat gacttaagat gttcagaatg tgcagacggc 4680 ggcatttcgc ctcgaatagt taatgctcac ataagcaatt tgtcagatca tctgattaaa 4740 ataatacctg atcgagagga ggtccagctg ccattgcttg ccggaggtga ggacctaaat 4800 aaccttgagg tggtcctatc actcgaagat gagtggccag acagtgacga tatcactatc 4860 ctgaacagga taggagagat gaacgacatt gatgggagga tgaaaaacta cctagaagtc 4920 atggcactat tgaatcctga tgttgtgata atcagacctg aaatactgga gttggaaatc 4980 ttgcggagag tatgtgaggt ggtaagacta gcatccgaag ggaagctcat catccacata 5040 cttgttgagg agccctcata tctggaaagt ggtgccatat atgagatgga gcgtgcattt 5100 ccgaggcata atcttttcca tgtgcaattc agcttcagaa agccaccaga ggggctgcac 5160 aaactctggt tgctgccaca ggatataact ctggccaggg ctgatgtggg cgactggctt 5220 gtgatcccct tcactcagct gctggatttc catgatacta tcacaccaga cacccgttta 5280 caccaccaaa gagaagcgat taggcaagat gttttttggt caacaaagga gcaggggggt 5340 ttaggcctgg tggtcttgca gcatatttgt accaaaacag agttgagtta tcgtttggac 5400 agatccaaag ttgatgtgga gatcaacaag atgatgatca aggaccctgt aatgggtggg 5460 aaatatgtta tcctaaagag gagatgctca tgggctatat tttccaccaa gtatgagttg 5520 ctatgttctg cagagagaat aaagggcaac ctcagtgccg atgggaagaa gatcacatca 5580 aaggacttct caagaacata caaagaagat atcataatat ttattatctc agtcttgatg 5640 agatcactgg actgtgacga gaagagggtc atgacattaa gttatgtgga gtgcttgcct 5700 gagctgctaa cattgaaacc aaggttcaat aaatcaggag taatcagtgt cagatatcta 5760 gattacttct ggttttttaa acgggtgtac tcatataaca accctgaggt tgcaatacct 5820 tactcagcag taataaaggg ggtcaacctt ggctctccta gaaaggaggg gtacagtctg 5880 gcatcatccg acggcgcacc gtga 5904 // |
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