 |
|
EBI DbfetchID BAA19848; SV 1; linear; genomic DNA; STD; PRO; 2142 BP. XX PA AB003330.1 XX DE Pseudomonas sp. alginate lyase XX OS Pseudomonas sp. OC Bacteria; Proteobacteria. OX NCBI_TaxID=306; XX FH Key Location/Qualifiers FH FT source 1..2142 FT /organism="Pseudomonas sp." FT /strain="OS-ALG-9" FT /mol_type="genomic DNA" FT CDS AB003330.1:389..2530 FT /codon_start=1 FT /transl_table=11 FT /gene="alyll" FT /product="alginate lyase" FT /note="The gene has activity as alginate lyase in E.coli." FT /db_xref="GOA:O05937" FT /db_xref="InterPro:IPR012480" FT /db_xref="UniProtKB/TrEMBL:O05937" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="BAA19848.1" FT /translation="MNYLKKVVLVSFCAFFSLSLMAQTHPSIMLTKANVAAVKKGVNTY FT PLLRQSYQAVKNAADKALAQPIVVPVPKDGGGGYTHEQHKKNYSNMLNCGVAYQISGEK FT KYADYVKNVMLNYASQYGKWPLHPKRKSEEDGGRIFWQSLNDFVWQLYTIQAYDLVYDG FT IPATDRKTIEEKLFVPILKFFTEDRYDVFNKIHNHGTWNLAAVGITGYVLNKREYVEMA FT IKGSKKDGKTGYLAQIDQLFSPDGYYMEGPYYQRYALLPFVLFAKAINNYEPSRKIFEY FT RDKLLSKAIHTSLQTSYTDKTFFPLNDAIKDKTYESVELVYGVDLAYADIKAEVDLLDI FT ARQQNRVIVSDAGLKVAADLAAGKAVPFKYQTLWIRDGGKGDEGGLGILRNGPNTDQQC FT VVLKAASQGMGHGHFDRLNLLFYDNTTEIFPDYGAARFLNIDTKNGGGYLPENNTWAKQ FT TVAHNALVVDQTSHFNAKLGPADKASPTLLYFSNQPNLKVVSAKEDKAYTDVTMLRTSA FT LVKVEGLDKPLLIDVMQAQSAKSHQYDLPFWYKGQLVNTSFPVTAKANQLTALGDKNGY FT QHIWLNASNPLEGKSGMVGLLNKNRFYTTHFVSDNPLEVKLLSIGANDPEMNLVDGKAF FT MLSSSGQNQTFVSITETHGGTDPINETVSSALPTVSGLKLIKSDAQQTIISFKVNERTY FT TYQINYTEKQQLYIIKIKE" XX SQ Sequence 2142 BP; 693 A; 420 C; 470 G; 559 T; 0 other; 2782949151 CRC32; atgaactact taaaaaaagt ggtattagta tctttttgtg ccttttttag cctatcgcta 60 atggcgcaaa cacatcccag cattatgcta accaaagcaa atgtggcggc cgtgaaaaaa 120 ggcgtaaata cctatccact tttacgccaa tcataccaag cggttaaaaa tgcggcagat 180 aaagcattgg cacaacctat tgtggtacct gtgcctaaag atggcggcgg tggttatacg 240 catgagcagc acaaaaaaaa ttacagcaac atgctgaact gcggagtagc ttatcaaatc 300 tccggagaaa agaaatatgc agactacgtg aaaaacgtaa tgctcaacta tgcttcgcaa 360 tatggaaaat ggccccttca tccaaaaaga aaaagtgagg aagatggtgg acgtattttt 420 tggcaaagcc tgaacgactt tgtatggcag ctatatacca tacaagctta tgatttggtt 480 tatgacggga ttcctgcaac tgacaggaaa accattgaag aaaaattgtt cgtgcctatc 540 ctcaagtttt ttaccgaaga taggtacgac gtcttcaaca aaatccacaa tcatggtacc 600 tggaatttgg cggctgttgg tattacaggt tacgtgctca acaaacgtga gtacgtagaa 660 atggctatta aaggctctaa aaaggatggt aaaaccggct acttggcgca aatagaccaa 720 ctgttttcgc ctgatggtta ttatatggaa ggcccgtatt atcagcgtta cgccttattg 780 cctttcgtat tgtttgccaa agcgatcaac aattacgagc cttcacgcaa aattttcgaa 840 tacagggaca aattgctttc aaaggcaatc catacctcat tgcaaacttc ttacaccgat 900 aaaactttct ttccgttaaa cgatgccatc aaggacaaaa cctacgagtc ggtggaattg 960 gtatatggag ttgatttggc ttatgccgat attaaggcag aggttgattt gctggacatt 1020 gccaggcagc aaaaccgcgt aattgtttct gatgcgggct taaaggtagc ggcagatttg 1080 gcagctggaa aagcagttcc atttaaatac caaacgttgt ggattagaga tggaggtaaa 1140 ggcgatgaag gtggattggg tattttacgt aacggtccaa acaccgatca gcaatgtgtg 1200 gtgttgaaag ctgcttcaca aggaatgggc cacgggcact ttgaccggtt aaacctatta 1260 ttttacgata acactaccga aattttcccc gattatggcg cagctagatt tttaaatatc 1320 gatactaaaa atggtggtgg ttacttgccc gaaaacaata cttgggcaaa acaaacggta 1380 gcccataatg ccttggtggt agaccaaact tcacacttta atgccaaatt ggggccagca 1440 gataaagcca gcccaacctt gctatacttt tcaaaccagc caaatttaaa agtggtgagc 1500 gctaaagaag acaaagctta taccgatgtg accatgctaa gaacttcggc attggtaaaa 1560 gttgaaggtt tggataagcc tttgttaatt gatgtgatgc aggcgcaatc agccaaaagt 1620 catcagtacg atttgccgtt ttggtacaaa ggacaattgg taaacacttc gttccctgtt 1680 acggcaaaag cgaatcagtt aaccgcactt ggagataaaa atggctatca acacatttgg 1740 ttaaacgcca gcaatccatt ggagggcaaa tcgggaatgg taggtttgtt gaacaaaaat 1800 cgtttctaca ccacacattt tgtgtctgat aatccactag aagtgaagtt actttctata 1860 ggtgccaatg atccggaaat gaacttggtg gatggcaagg cattcatgct atcaagcagt 1920 ggccaaaatc aaacctttgt gagcattaca gaaacgcatg gcggtacaga tccaatcaat 1980 gaaacggttt catcggcttt gccaacagtg agcgggctaa agttgattaa atcagatgca 2040 caacaaacca ttatcagctt taaggttaat gaaaggacct atacctatca gatcaactat 2100 acagagaaac agcaattata tatcattaag ataaaggaat aa 2142 // |
|