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EBI DbfetchID BAA00544; SV 1; linear; genomic DNA; STD; VRL; 2559 BP. XX PA D00647.1 XX DE Bovine leukemia virus hypothetical protein XX OS Bovine leukemia virus OC Viruses; Retro-transcribing viruses; Retroviridae; Orthoretrovirinae; OC Deltaretrovirus. OX NCBI_TaxID=11901; XX FH Key Location/Qualifiers FH FT source 1..2559 FT /organism="Bovine leukemia virus" FT /isolate="Australian isolate" FT /mol_type="genomic DNA" FT /clone="pBLV-A1" FT CDS D00647.1:<2318..4876 FT /codon_start=1 FT /gene="pol" FT /note="putative: This is the largest reading frame in the FT pol gene region." FT /db_xref="GOA:P25059" FT /db_xref="HSSP:1C1A" FT /db_xref="InterPro:IPR010661" FT /db_xref="UniProtKB/Swiss-Prot:P25059" FT /func_characterised="identical sequence" FT /protein_id="BAA00544.1" FT /translation="GTSIPFKLERLQALQDLVHRSLEAGYISPWDGPGNNPVFPVRKPN FT GAWRFVHDLRVTNALTKPIPALSPGPPDLTAIPTHLPHIICLDLKDAFFQIPVEDRFRS FT YFAFTLPTPGGLQPHRRFAWRVLPQGFINSPALFERALQEPLRQVSAAFSQSLLVSYMD FT DILYVSPTEEQRLQCYQTMAAHLRDLGFQVASEKTRQTPSPVPFLGQMVHERMVTYQSL FT PTLQISSPISLHQLQTVLGDLQWVSRGTPTTRRPLQLLYSSLKGIDDPRAIIHLSPEQQ FT QGIAELRQALSHNARSRYNEQEPLLAYVHLTRAGSTLVLFQKGAQFPLAYFQTPLTDNQ FT ASPWGLLLLLGCQYLQAQALSSYAKTILKYYHNLPKTSLDNWIQSSEDPRVQELLQLWP FT QISSQGIQPPGPWKTLVTRAEVFLTPQFSPEPIPAALCLFSDGAARRGAYCLWKDHLLD FT FQAVPAPESAQKGELAGLLAGLAAAPPEPLNIWVDSKYLYSLLRTLVLGAWLQPDPVPS FT YALLYKSLLRHPAIFVGHVRSHSSASHPIASLNNYVDQLLPLETPEQWHKLTHCNSRAL FT SRWPNPRISAWDPRSPATLCETCQRLNPTGGGKMRTIQRGWAPNHIWQADITHYKYKQF FT TYALHVFVDTYSGATHASAKRGLTTQTTIEGLLEAIVHLGRPKKLNTDQGANYTSKTFV FT RFCQQFGISLSHHVPYNPTSSGLVERTNGLLKLLLSKYHLDEPHLPMTQALSRALWTHN FT QINLLPILKTRWELHHSPPLAVISEGGETPKGSDKLFLYKLPGQNNRRWLGPLPALVEA FT SGGALLATNPPVWVPWRLLKAFKCLKNDGPEDAPNRSSDG" XX SQ Sequence 2559 BP; 595 A; 822 C; 530 G; 612 T; 0 other; 4222136408 CRC32; ggtacctcaa ttccctttaa actagaacgc ctccaggccc ttcaagacct ggtccatcgc 60 tctctggagg caggttatat ctccccctgg gacgggccag gcaataatcc agtcttcccg 120 gtacggaaac caaatggtgc ctggaggttt gtgcatgatc tacgagttac aaatgctctt 180 acaaagccca tcccggcact ctcccccgga ccgccagacc ttaccgctat ccccacacac 240 cttccacata tcatttgttt agatctcaaa gatgccttct tccagattcc agtcgaagac 300 cgcttccgct cctactttgc ttttaccctc cctacccccg ggggacttca acctcataga 360 cgcttcgcct ggcgggtcct acctcaaggc ttcattaaca gcccagctct tttcgaacgg 420 gcacttcagg aaccccttcg ccaagtttcc gccgcctttt cccagtctct tctggtgtcc 480 tatatggacg atatccttta cgtttcgcct acagaggaac aacggttaca atgttatcaa 540 actatggctg cccacctccg ggacctaggg tttcaggtgg cgtctgaaaa gactcgccag 600 acgccttcgc ctgtcccttt cttgggacaa atggtccatg agcggatggt cacctaccag 660 tccctaccta ccttgcagat ctcatcccca atttctcttc accaattaca gacggtcttg 720 ggagacctcc aatgggtctc taggggcaca cccactaccc gccggcccct gcaacttcta 780 tactcttctc ttaaaggcat cgatgaccca agggccatca tccacctttc cccggaacag 840 cagcagggca ttgcagagct tcgacaagcc ctgtcccata acgcaagatc cagatataac 900 gagcaggaac ccctgctggc ctacgtacac ctcacccggg cggggtccac cctggtactc 960 ttccagaagg gcgctcaatt tcccctggcc tactttcaga cccccttgac tgacaaccaa 1020 gcctcacctt ggggcctcct tctcctgctg ggatgccaat atctgcaggc tcaggcctta 1080 agctcctatg ccaagaccat actcaaatac tatcacaatc ttcctaaaac ctctctagac 1140 aattggatcc aatcatctga ggaccctcga gttcaggagt tgttgcaatt gtggccccag 1200 atttcctctc agggaataca gcccccgggc ccctggaaga ccttagtcac cagggcagag 1260 gtttttttga cgccccagtt ctcccctgaa ccgatccctg cggccctttg cctctttagt 1320 gacggggctg caagacgagg agcatattgc ttatggaaag accacctttt ggactttcag 1380 gccgttccag ctccagagtc cgcccaaaag ggagaactag caggtctttt ggcgggctta 1440 gcagccgccc cgcctgaacc tttaaatata tgggtagatt ccaaatacct gtactccttg 1500 ctcagaaccc tagttctagg agcttggctt caacctgacc ccgtaccctc ttatgccctc 1560 ctatataaaa gcctcctccg acatccagca atctttgttg gtcatgttcg gagccactct 1620 tcagcatccc accctattgc ttccctgaac aattatgtag atcaactgct tcccttagaa 1680 actccagagc aatggcataa gctcacccac tgcaactctc gggccttgtc tcgatggccg 1740 aacccacgta tttctgcctg ggatccccgt tcccccgcta cgctgtgtga aacctgtcaa 1800 aggctcaacc caactggagg cggaaagatg cggactattc agagagggtg ggccccaaat 1860 catatctggc aggccgatat aactcattat aaatacaaac agttcaccta cgctttgcac 1920 gtgtttgtag atacttactc tggagctact catgcctcag caaagcgagg gctcaccact 1980 caaacgacca ttgagggcct tcttgaggcc atagtgcatc taggtcgtcc aaaaaagcta 2040 aacaccgacc aaggtgctaa ctacacctcc aaaacctttg tcaggttttg ccagcagttc 2100 ggaatttccc tttctcatca tgttccctac aaccccacaa gttcagggtt agtggaacgg 2160 acaaatggac tgctcaaact tcttttgtct aaatatcact tagacgaacc ccaccttccc 2220 atgactcagg ccctttctcg agccctctgg actcacaatc agattaacct cctaccaatt 2280 ctaaagacca gatgggagct acaccattca cccccacttg ctgtcatttc agagggcgga 2340 gaaacaccca agggctctga taaactcttt ttgtacaagc tccccgggca aaacaatcgt 2400 cggtggctag gaccactccc ggccctagtc gaagcctcgg gaggcgctct cctggctacc 2460 aacccccccg tgtgggttcc ctggcgtttg ctgaaggcct tcaaatgcct aaagaacgac 2520 ggtcccgaag acgccccgaa ccgatcatca gatgggtaa 2559 // |
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