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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ACD48513; SV 1; linear; genomic DNA; STD; PRO; 1362 BP.
XX
PA   CP001072.2
XX
DE   Helicobacter pylori Shi470 alpha-(1,3)-fucosyltransferase
XX
OS   Helicobacter pylori Shi470
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Helicobacteraceae; Helicobacter.
OX   NCBI_TaxID=512562;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1362
FT                   /organism="Helicobacter pylori Shi470"
FT                   /strain="Shi470"
FT                   /mol_type="genomic DNA"
FT                   /country="Peru:Shimaa (Amazonian region)"
FT                   /isolation_source="gastric antrum from Amerindian resident"
FT   CDS             complement(CP001072.2:1088529..1089890)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="HPSH_05520"
FT                   /product="alpha-(1,3)-fucosyltransferase"
FT                   /db_xref="GOA:B2UUI1"
FT                   /db_xref="InterPro:IPR016646"
FT                   /db_xref="UniProtKB/TrEMBL:B2UUI1"
FT                   /protein_id="ACD48513.1"
FT                   /translation="MFQPLLDAYTDSTHLDETTHKPPINIALANWWPLKNSEKKGFRDF
FT                   ILHVILKQRYKIILHSNPNEPSDLVFGNPLEQARKILSYQNTKRVFYTGENEAPNFNLF
FT                   DYAIGFDELNFNDRYLRMPLYYASLHYKAEIVNDTTSPYKLKADSLYTLKKPSHEFKEN
FT                   HPHLCALINNEIDPLKRGFASFVASNANAPVRNAFYEALNSIWPVAGGGSVKNTLGYNV
FT                   KNKNEFLSQYKFNLCFENSQGYGYVTEKILDAYFSHTIPIYWGSPSVAKDFNPKSFVNV
FT                   HDFNNFDEAIDYIRYLHTHQNAYLDMLYENPLNTIDGKAGFYQNLSFEKILDFFKTILE
FT                   NDTIYHNPSALCRDLNEPLVSIDDLRRDHDDLRVNYDDLRVNYDDLRVNYDDLRVNYDD
FT                   LRVNYDDLRRDYERLLSKATPLLELSQNTSFKIYRKAYQKSLPLLCTIRRWVKK"
XX
SQ   Sequence 1362 BP; 441 A; 261 C; 248 G; 412 T; 0 other; 1902338569 CRC32;
     atgttccaac ccctattaga tgcttataca gacagcaccc atttagatga aacaacccat        60
     aagcccccaa ttaatatagc cctagccaat tggtggcctt taaagaatag cgaaaaaaaa       120
     ggattcagag atttcatttt gcatgtcatc ctaaaacaac gctataaaat cattctacac       180
     agcaacccta acgaaccctc agatctagtc tttggcaatc ctttggaaca ggctagaaag       240
     atcttatcct atcaaaacac caaaagagtg ttttacaccg gcgagaatga agcgcctaat       300
     ttcaacctct ttgattacgc cataggcttt gatgaattga atttcaacga tcgttatttg       360
     agaatgcctt tgtattacgc ttctttgcat tataaagccg agattgttaa tgacaccact       420
     tcaccctata aactcaaagc ggacagcctt tatactttaa aaaaaccctc ccatgaattt       480
     aaagaaaacc acccacattt atgcgcgcta atcaataatg agatcgatcc tttgaaaaga       540
     gggtttgcca gttttgtagc gagcaacgct aacgctcctg ttaggaacgc tttctatgag       600
     gctttaaatt ctatttggcc agtggctggg ggaggaagcg tgaaaaacac tctgggctat       660
     aatgtcaaaa ataaaaacga atttttaagc caatacaaat tcaacctctg ttttgaaaac       720
     tcacaaggct atggctatgt aaccgaaaaa atccttgatg cgtattttag ccatactatc       780
     cctatttatt gggggagtcc cagcgtggcg aaagatttta accctaaaag ttttgtgaat       840
     gtccatgatt tcaacaactt tgatgaagcg atagattata tcaggtattt acacacgcac       900
     caaaacgctt atttagacat gctctatgaa aaccctttaa acaccattga tgggaaagct       960
     ggtttttacc aaaatttgag ttttgaaaag atcttagatt tttttaaaac gattttagag      1020
     aacgatacga tttatcataa cccttccgct ctttgtcgtg atttgaatga gccgttagtt      1080
     tccattgatg atttgagaag agatcatgat gatttgaggg ttaattatga tgatttgagg      1140
     gttaattatg atgatttgag ggttaattat gatgatttga gggttaatta tgatgatttg      1200
     agggttaatt atgatgattt gagaagagat tacgaacgcc tcttatcaaa ggctacccct      1260
     cttttggagc tatcccagaa cacctctttt aaaatctatc gcaaagctta tcaaaaatcc      1320
     ttacccttgc tatgcaccat aaggaggtgg gttaaaaaat ag                         1362
//
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