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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ACB17123; SV 1; linear; genomic DNA; STD; PRO; 1689 BP.
XX
PA   CP000970.1
XX
DE   Escherichia coli SMS-3-5 choline dehydrogenase
XX
OS   Escherichia coli SMS-3-5
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=439855;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1689
FT                   /organism="Escherichia coli SMS-3-5"
FT                   /strain="SMS-3-5"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CP000970.1:350805..352493)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="betA"
FT                   /locus_tag="EcSMS35_0342"
FT                   /product="choline dehydrogenase"
FT                   /EC_number="1.1.99.1"
FT                   /note="identified by match to protein family HMM PF00732;
FT                   match to protein family HMM PF05199; match to protein
FT                   family HMM TIGR01810"
FT                   /db_xref="GOA:B1LIJ7"
FT                   /db_xref="InterPro:IPR000172"
FT                   /db_xref="InterPro:IPR007867"
FT                   /db_xref="InterPro:IPR011533"
FT                   /db_xref="InterPro:IPR012132"
FT                   /db_xref="UniProtKB/Swiss-Prot:B1LIJ7"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ACB17123.1"
FT                   /translation="MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRT
FT                   QMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDL
FT                   DNWAQEPGLENWSYLDCLPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIE
FT                   AGVQAGYPRTDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRSNLTIRTHAMT
FT                   DHIIFDGKRAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAGLLAEF
FT                   DIPLVHELPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGIGAS
FT                   NHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRI
FT                   KSRAPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYHGREISPGVECQTDE
FT                   QLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLN
FT                   ATTIMIGEKMADMIRGKDALPRSTAGYYVANGMPVRAKKMSRDVN"
XX
SQ   Sequence 1689 BP; 378 A; 475 C; 506 G; 330 T; 0 other; 2240128613 CRC32;
     ttgcaatttg actacatcat tattggtgcc ggctcagccg gcaacgtcct cgctacccgt        60
     ctgactgaag atccgaacac aaccgtgctg ctgcttgaag caggcggccc ggactatcgc       120
     tttgacttcc gcacccagat gcccgccgcg ctggcgttcc cgctacaggg caaacgctac       180
     aactgggcct atgagacgga acccgaaccg tttatgaaca accgccgcat ggagtgcgga       240
     cgcggcaaag gtctgggcgg ttcatcgctg atcaacggca tgtgttacat ccgtggtaac       300
     gcgctggatc tcgataactg ggcgcaagaa cccggtctgg agaactggag ctacctcgac       360
     tgtctgccct actaccgcaa ggccgagact cgcgacgtgg gcgagaacga ctaccacggc       420
     ggcgacggcc cggtgagcgt caccacctcc aaacccggcg tcaatccgct gtttgaagcg       480
     atgattgaag cgggcgtgca ggcgggctac ccgcgcacgg acgatctcaa cggctatcag       540
     caagaaggtt ttggcccgat ggatcgcacc gtcacgccgc atggccgtcg cgccagcacc       600
     gcgcgtggct atctcgatca ggccaaatcg cgctctaacc tgaccattcg tactcacgcc       660
     atgaccgatc acatcatttt tgacggcaaa cgcgcggtgg gcgtcgagtg gctggaaggc       720
     gacagcacca ttccgacccg cgcggcggcg aataaagaag tgctgttatg tgcaggcgcg       780
     attgcttcac cgcagatcct gcaacgctcc ggcgtcggca acgctggact gctggcggag       840
     tttgatattc cgctggtgca tgaattacct ggcgtcggcg aaaatcttca ggatcacctg       900
     gagatgtatc tgcaatatga gtgcaaagaa ccggtttccc tctaccctgc cctgcagtgg       960
     tggaatcagc cgaaaatcgg tgcggagtgg ctgtttggcg gcaccggcat tggtgccagc      1020
     aaccactttg aagcaggcgg atttattcgc agccgtgagg aatttgcgtg gccgaatatt      1080
     cagtaccatt tcctgccagt ggcgattaac tataacggct cgaacgcagt gaaagagcac      1140
     ggcttccagt gccacgtcgg atcgatgcgc tcgccaagcc gtgggcatgt gcggattaaa      1200
     tcccgcgccc cgcaccagca tccagcgatt ctgtttaact acatgtcgca cgagcaggac      1260
     tggcaggagt tccgcgacgc aattcgcatc acccgggaga tcatgcatca accggcgctg      1320
     gatcagtatc atggccgcga aatcagcccc ggtgtcgaat gccagacgga tgagcagctc      1380
     gatgagtttg tgcgtaatca cgccgaaacc gccttccacc catgcggtac gtgcaaaatg      1440
     gggtacgacg agatgtccgt tgtggatggc gaaggccgcg tgcacgggct ggaaggatta      1500
     cgcgtagtcg atgcgtcaat tatgccgcag attatcaccg gcaatctgaa cgccacgacg      1560
     attatgattg gcgagaaaat ggcggatatg attcgcggga aggatgcgtt gccgaggagc      1620
     acggcgggat attatgtggc aaatgggatg ccggtgagag cgaaaaaaat gagtcgtgat      1680
     gtgaactga                                                              1689
//
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