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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABZ00455; SV 1; linear; genomic DNA; STD; PRO; 1104 BP.
XX
PA   CP000926.1
XX
DE   Pseudomonas putida GB-1 Poly(beta-D-mannuronate) lyase
XX
OS   Pseudomonas putida GB-1
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=76869;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1104
FT                   /organism="Pseudomonas putida GB-1"
FT                   /strain="GB-1"
FT                   /mol_type="genomic DNA"
FT   CDS             CP000926.1:5106767..5107870
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="PputGB1_4568"
FT                   /product="Poly(beta-D-mannuronate) lyase"
FT                   /EC_number="4.2.2.3"
FT                   /note="PFAM: Alginate lyase KEGG: pen:PSEEN4542 alginate
FT                   lyase AlgL"
FT                   /db_xref="GOA:B0KGQ9"
FT                   /db_xref="InterPro:IPR008397"
FT                   /db_xref="UniProtKB/Swiss-Prot:B0KGQ9"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABZ00455.1"
FT                   /translation="MTLLKRISSPALLALALFGGAAHAALVPPQGYYEGIEKLKTGDGN
FT                   FRCEAAPKPYTGALQFRSKYEGSDKARATLNVASEKAFRKSTEDITTLEKGVSKMVGQY
FT                   MRDGRPAQLDCTLAWLGTWARADALLSTDYNHTGKSMRKWALGSMSGSWLRLKFSHSQP
FT                   LAAHQAEAEVIEKWFARLAEQTVRDWSDLPLEKINNHSYWAAWSVMATAVATDRRDLFD
FT                   WAVKEYKVGANQVDDQGFLPNEIKRKQRALAYHNYALPPLAMIASFAQANGVDLRKENN
FT                   FALQRLGEGVLAGARDPSQFKARTGEKQDMKDLKVDSKYAWLEPWCELYHCVGDTLQRK
FT                   HGMQPFNSFRLGGDLTRVYDPNAESKK"
XX
SQ   Sequence 1104 BP; 237 A; 357 C; 340 G; 170 T; 0 other; 2371568677 CRC32;
     atgaccctat tgaagcgaat ttccagcccc gccctgctcg ctttggccct gtttggcggt        60
     gccgcgcacg ctgcgctggt acccccgcag ggttactacg aggggatcga aaagctcaag       120
     accggcgacg gcaatttccg ctgcgaagcg gcgcccaagc cgtacaccgg cgcgttgcag       180
     tttcgcagca aatacgaagg ctctgacaag gcgcgggcaa cgctcaatgt tgcctcggaa       240
     aaggccttcc gcaagtcgac cgaagacatc accacgcttg agaaaggcgt gagcaagatg       300
     gttggccagt acatgcgcga tggccgcccg gcgcagctcg attgcacctt ggcctggctg       360
     ggcacttggg cgcgcgccga cgcattgctg tccaccgact acaaccacac cggcaagtcg       420
     atgcgcaaat gggcactggg cagcatgagc ggctcgtggc tgcgcctgaa gttctcccac       480
     tcgcagccgc tggccgcgca ccaggctgaa gccgaagtca tcgaaaaatg gttcgcccgc       540
     ctggctgaac agaccgtgcg cgactggagc gacctgccgc tggagaagat caacaaccac       600
     agctactggg cggcctggtc ggtcatggcg accgctgtcg ccaccgaccg tcgcgacctg       660
     ttcgactggg ccgtgaagga atacaaggtg ggcgccaacc aggtggatga ccagggcttt       720
     ctgcccaacg aaatcaagcg caagcagcgc gcactggcct accacaacta tgccctgccg       780
     ccactggcga tgattgccag ctttgcccag gccaatggcg tggacctgcg caaagagaac       840
     aacttcgccc tgcagcgtct gggtgaaggc gtactggccg gtgcccgcga cccgagccag       900
     ttcaaggccc gcaccggcga gaagcaggac atgaaggacc tcaaggtcga cagcaagtat       960
     gcctggctcg aaccctggtg cgaactgtac cactgcgtcg gcgacaccct gcagcgcaag      1020
     cacggcatgc agccgttcaa cagcttccgg ctgggcggcg acctgacccg ggtctacgac      1080
     ccgaacgcag agagcaagaa atag                                             1104
//
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