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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABX69347; SV 1; linear; genomic DNA; STD; PRO; 1137 BP.
XX
PA   CP000886.1
XX
DE   Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7
DE   hypothetical protein
XX
OS   Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Salmonella;
OC   Salmonella enterica subsp. enterica serovar Paratyphi B.
OX   NCBI_TaxID=272994;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1137
FT                   /organism="Salmonella enterica subsp. enterica serovar
FT                   Paratyphi B str. SPB7"
FT                   /strain="SGSC4150; SPB7"
FT                   /mol_type="genomic DNA"
FT                   /serovar="Paratyphi B"
FT                   /culture_collection="ATCC:BAA-1250"
FT   CDS             complement(CP000886.1:3348707..3349843)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="SPAB_04019"
FT                   /product="hypothetical protein"
FT                   /note="KEGG: stm:STM3220 3.3e-204 ygjO; putative ribosomal
FT                   RNA small subunit methyltransferase D K00564 COG: COG2813
FT                   16S RNA G1207 methylase RsmC Psort location: Cytoplasmic,
FT                   score:8.96"
FT                   /db_xref="GOA:A9N601"
FT                   /db_xref="InterPro:IPR007848"
FT                   /db_xref="UniProtKB/Swiss-Prot:A9N601"
FT                   /inference="protein motif:HMMPfam:IPR007848"
FT                   /inference="protein motif:ScanRegExp:IPR002052"
FT                   /inference="similar to AA sequence:INSD:AAV78922.1"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABX69347.1"
FT                   /translation="MSHVDDGFRSLTLKRFPQTDDVNPLLAWEAADEYLLQQLDETEIR
FT                   GPVLILNDTFGALSCALAEHSPYSIGDSYLSELGTRENLRHNGIAESSVTFLDSTADYP
FT                   QAPGVVLIKVPKTLALLEQQLRALRKVVTVQTRIIAGAKARDIHTSTLELFEKVLGPTT
FT                   TTLAWKKARLINCTFSHPQLADAPQTLSWKLEDTGWTIHNHANVFSRTGLDIGARFFMQ
FT                   HLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFE
FT                   RCEFMINNALSGVEPFRFNAVFCNPPFHQKHALTDNIAWEMFHHARRCLKINGELYIVA
FT                   NRHLDYFHKLKKIFGNCATIATNNKFVILKAVKQGRRR"
XX
SQ   Sequence 1137 BP; 272 A; 285 C; 325 G; 255 T; 0 other; 1789719919 CRC32;
     atgagccacg tagacgacgg tttccgttca ctgacgctga aacgttttcc gcaaacggat        60
     gatgttaacc cgcttctggc gtgggaggcg gccgatgagt atctgctgca acagttggat       120
     gagacggaaa ttcgcggccc ggtgctgatc ctgaatgata cgtttggcgc gctaagctgt       180
     gcgctggcgg agcattcgcc atacagtatt ggcgattcgt atttaagcga actgggtacg       240
     cgagagaatt tacgccataa cggcatcgcg gagtccagcg taacgtttct cgacagtacc       300
     gctgactacc cgcaggcgcc gggcgtggta ttgattaagg taccgaaaac actggcattg       360
     ctggaacagc agttacgcgc tttgcgtaag gtcgttacgg tgcaaacgcg tattatcgcc       420
     ggcgcgaaag cgcgtgatat tcatacctct acgctggaac tgtttgaaaa agtgctgggc       480
     ccaaccacga cgacgctggc gtggaagaaa gcgcgcctga ttaactgtac cttcagtcat       540
     ccgcaactgg ccgacgcgcc gcaaacgcta agctggaaac tggaagatac aggctggacg       600
     attcacaacc acgcgaatgt gttttctcgt accggattgg atatcggcgc gcgcttcttt       660
     atgcagcatt tgccggaaaa cctcgacggg gagattgtcg atctcggctg cggcaatggg       720
     gtgattggcc tgagcttact ggcgaaaaat ccgcaggcga acgtggtatt tgtcgatgaa       780
     tcgccgatgg cggtagattc cagccgtttg aatgtagaaa cgaacctgcc ggaagcgttc       840
     gaacgctgcg aatttatgat caataacgcg ctctccggcg tggagccgtt ccgttttaac       900
     gcggtgttct gcaacccgcc gttccaccag aaacatgcgc tgacggacaa tatcgcctgg       960
     gagatgttcc atcacgcccg ccgctgcctg aaaatcaacg gcgaactgta tattgtggcg      1020
     aaccgccatc tggactattt ccacaagctg aagaagattt tcggtaattg cgcgacgata      1080
     gcaaccaaca ataagtttgt tattttgaaa gcggtgaagc agggacgccg tcgataa         1137
//
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