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EBI Dbfetch

ID   ABU71821; SV 1; linear; genomic DNA; STD; PRO; 3075 BP.
XX
PA   CP000789.1
XX
DE   Vibrio harveyi ATCC BAA-1116 hypothetical protein
XX
OS   Vibrio harveyi ATCC BAA-1116
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
OX   NCBI_TaxID=338187;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3075
FT                   /organism="Vibrio harveyi ATCC BAA-1116"
FT                   /chromosome="I"
FT                   /strain="ATCC BAA-1116; BB120"
FT                   /mol_type="genomic DNA"
FT   CDS             CP000789.1:2886623..2889697
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="VIBHAR_02868"
FT                   /product="hypothetical protein"
FT                   /note="KEGG: vpa:VP2036 0. putative DNA polymerase III
FT                   alpha chain K02337 COG: COG0587 DNA polymerase III, alpha
FT                   subunit Psort location: Cytoplasmic, score:9.97"
FT                   /db_xref="GOA:A7MUN4"
FT                   /db_xref="InterPro:IPR004805"
FT                   /db_xref="UniProtKB/Swiss-Prot:A7MUN4"
FT                   /inference="protein motif:Gene3D:IPR012340"
FT                   /inference="protein motif:HMMPfam:IPR004013"
FT                   /inference="protein motif:HMMPfam:IPR004365"
FT                   /inference="protein motif:HMMPfam:IPR011708"
FT                   /inference="protein motif:HMMSmart:IPR003141"
FT                   /inference="protein motif:HMMTigr:IPR004805"
FT                   /inference="protein motif:superfamily:IPR008994"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABU71821.1"
FT                   /translation="MSYAELFCQSNFSFLTGASHAEELVLQAAFYRYQAIAITDECSVA
FT                   GVVKAHATIEQHKLDIKQIVGSMFWLNDECQVVLLCPCRKAYAELCRIITNARRRSEKG
FT                   SYQLSEWDLMSVRHCFVLWLPTHQESDHYWGRWLQQHHAHRLWVAIQRHLGGDDDAYTT
FT                   HCELLANEFQLPIAACGGVLMHAVERLPLQHVLTAVKHGCSVDKLGFSRLSNAERALRP
FT                   LNKLSRIYKSKWLEESTHIADLCEFKLSDLKYEYPTELIPNGYTPTSYLRMLVERGKKL
FT                   RFPEGIPADIHQTIENELALIEELEYHYYFLTIHDIVMFAKQQGILYQGRGSAANSVVC
FT                   YCLEITAVDPRQISVLFERFISREREEPPDIDVDFEHERREEVIQYIYKKYGRERAALA
FT                   ATVISYRFKSAVREVGKALGIEETQLDFFIKNVNRRDRTQGWQAQIIELGLQPESLKGQ
FT                   QFIQLVNEITGFPRHLSQHVGGFVISSGPLYELVPVENASMEDRTIIQWDKDDLESLKL
FT                   LKVDVLALGMLNAIRKCFQLVEKHHQRSLSIAEITRLQDDPHVYRMIQKADTVGVFQIE
FT                   SRAQMSMLPRLKPARYYDLVVQIAIARPGPIQGDMVHPFLKRRNGEEPISYPSEEVKSV
FT                   LERTMGVPIFQEQVIKLAMVAAGFSGGEADQLRRAMAAWKKNGDLAKFKPKLIDGMRER
FT                   GYDLEFAERIFDQICGFGEYGFPESHSASFAVLAYCSAWLKFYYPAEFYTALLNSQPMG
FT                   FYSPSQLIQDARRHGVEVLPVCINHSSYQHHLVQRPNGRLGVQLGFRLVKGFNQESASR
FT                   LVERRPSTGYRAIQEVKQILRNRRDIELLASADAFQILSGNRYNARWAAMDSLSDLPLF
FT                   NHIEEPMANYQAQPSEYENLIEDYASTGLSLSRHPITLLEEAGKLPRFTRMKQLVEKEH
FT                   NSLVTVIGVVTGRQSPGTAAGVTFFTLEDDTGNINVVVWRATARAQKQAYLTSKVLMVK
FT                   GILEREGEVTHVIAGKLIDCTHNLAELKSKSRDFH"
XX
SQ   Sequence 3075 BP; 805 A; 719 C; 762 G; 789 T; 0 other; 3894444958 CRC32;
     atgagttacg cagaactgtt ttgtcagtcc aacttctcct ttctcaccgg cgcttctcat        60
     gcagaagagt tggtattgca ggcggcgttt tatcgctatc aagccattgc gatcaccgat       120
     gagtgctcag ttgcaggcgt agtgaaagcc catgctacca tcgagcagca taaactcgac       180
     atcaaacaaa tcgtcggcag tatgttttgg ctcaatgatg aatgccaagt ggtactgctt       240
     tgcccttgcc gtaaagctta tgctgagctg tgccggatca tcaccaatgc gagacgtcgc       300
     agcgagaaag gcagttatca attgtctgag tgggatttga tgtcggttcg ccattgtttt       360
     gtactgtggc tcccaactca tcaagagagc gaccattatt ggggacgctg gctccagcag       420
     catcacgctc atcgtttatg ggtcgcgatt cagcgtcatt taggtggcga cgacgatgcc       480
     tacaccacgc actgtgagtt actggcaaac gagttccaat tgccaattgc cgcctgtggc       540
     ggcgtcttaa tgcatgccgt tgagcgctta cctttgcaac atgtcctgac agcagtaaag       600
     cacggttgca gcgttgataa gctcggcttt agtcgtttat ccaatgctga gcgagcattg       660
     cgcccactga ataaactgtc tcgaatttac aaatctaaat ggctagaaga aagcacccat       720
     attgcggact tgtgcgaatt caaactctca gatttgaaat acgaataccc aacagaactg       780
     attccaaatg gttacacccc tacttcttat ctgcgtatgt tggtcgagcg tggtaaaaag       840
     ttgcgctttc ctgagggcat acccgcagat attcatcaaa ccatcgagaa tgagttagcg       900
     ctcattgaag agctggaata tcactattac tttctcacca tccacgacat cgtgatgttt       960
     gctaaacagc aaggcattct ctatcaaggg cgaggctcag cggcaaactc ggtggtgtgt      1020
     tactgcttag aaatcaccgc cgtcgatcct agacaaatct cggttctgtt cgaacgcttt      1080
     attagccgag agcgagaaga gccgccagac attgacgtcg actttgaaca cgagcgccgt      1140
     gaagaagtca ttcaatatat ctacaagaag tacgggcgcg agcgtgccgc tttagcagct      1200
     accgtgatca gctatcgctt taaaagcgcc gtgcgtgagg taggtaaagc gctagggatt      1260
     gaagaaacgc aattggattt cttcatcaaa aacgttaatc gacgtgatcg cacccaaggt      1320
     tggcaagcgc aaatcatcga attggggtta caaccagagt cgttaaaggg ccagcaattt      1380
     atccagttgg tgaacgagat caccggcttt ccgcgccatt tatctcagca cgtgggcggc      1440
     tttgtgattt catcaggccc tttgtatgaa ctggtgcctg tcgaaaatgc ttcgatggaa      1500
     gatcgtacta ttattcaatg ggataaagat gatttagaaa gcttaaagct gttaaaagtc      1560
     gatgtgctgg cactgggcat gttgaatgcg atccgtaaat gctttcaatt ggtcgagaag      1620
     caccaccagc gatccctgtc gattgccgag atcacgcgcc tgcaagatga tccgcacgta      1680
     taccgcatga tccaaaaagc cgacaccgtt ggcgtgtttc aaattgagtc tcgcgcgcaa      1740
     atgagcatgc tgccacgctt aaagcctgca cgttactacg acttagtcgt acagattgct      1800
     attgcccgtc cgggcccaat ccaaggtgat atggtccatc cgtttttaaa aaggcgtaac      1860
     ggtgaagagc cgatcagcta tccatcagaa gaagtgaaaa gcgtactaga gcgaaccatg      1920
     ggcgtaccaa ttttccaaga acaagtgatc aaactcgcga tggttgctgc ggggtttagt      1980
     ggtggagaag ccgatcagct acgccgtgcg atggcagcat ggaagaagaa cggcgatctt      2040
     gccaagttca aaccgaagtt aatcgacggg atgcgtgaac gtggctatga cttagagttt      2100
     gcggaacgca tcttcgatca aatctgcggt tttggtgaat acggttttcc agaaagtcac      2160
     tcagcctctt tcgcagtgct ggcttactgc tctgcatggt tgaagtttta ctaccctgct      2220
     gagttctata ctgccctact aaatagtcaa ccgatgggtt tttatagccc ttcgcaattg      2280
     attcaagatg cgcgccgaca cggtgtcgaa gtgttgcctg tttgcatcaa tcactcttcg      2340
     tatcagcacc atttggttca gcgtcctaat ggccgtcttg gtgtacaact gggctttcgt      2400
     ttagtaaagg gctttaatca agaaagcgct tctcgactgg ttgagcgccg accaagcact      2460
     ggctatcgtg ctatccaaga ggtgaaacag atcttaagaa accgccgcga tattgaatta      2520
     ctcgcttctg ccgatgcgtt tcagatcctt tctggcaatc gctataacgc gcgttgggcc      2580
     gcaatggatt cgttgtcaga tttgcctttg tttaatcaca tagaagaacc aatggcgaat      2640
     taccaagctc aaccttctga atacgagaat ttgattgaag attacgccag caccggatta      2700
     tcactgagcc gacacccgat tactctgctg gaagaagcag gcaagttacc acgctttact      2760
     cggatgaagc agttggtaga aaaggagcac aattctttag tgacggtcat cggtgttgtg      2820
     acaggtagac aatctccagg cacggcagca ggtgtgacct ttttcacttt agaagatgat      2880
     acgggcaaca ttaatgtggt ggtctggcga gcaaccgcgc gcgcccaaaa gcaagcttat      2940
     ctcacttcga aagtcttgat ggtcaaaggg attttagaaa gagaaggaga agtgacgcat      3000
     gtaattgcag gaaagctcat cgattgcaca cacaaccttg ctgagctaaa aagtaaatct      3060
     cgtgacttcc attaa                                                       3075
//


  
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