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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABS48580; SV 1; linear; genomic DNA; STD; PRO; 978 BP.
XX
PA   CP000720.1
XX
DE   Yersinia pseudotuberculosis IP 31758 lysyl-tRNA synthetase-like protein
XX
OS   Yersinia pseudotuberculosis IP 31758
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Yersinia.
OX   NCBI_TaxID=349747;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..978
FT                   /organism="Yersinia pseudotuberculosis IP 31758"
FT                   /strain="IP 31758"
FT                   /serotype="O:1b"
FT                   /mol_type="genomic DNA"
FT                   /isolation_source="stool of a patient presenting with
FT                   scarlet-like fever in the Primorski region of the former
FT                   USSR; in 1971 sent to the Institut Pasteur (Paris, France)
FT                   by Dr. Timofeeva (Antiplague Institute, Irkoutsk)"
FT                   /collection_date="1966"
FT   CDS             complement(CP000720.1:4134183..4135160)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="genX"
FT                   /locus_tag="YpsIP31758_3665"
FT                   /product="lysyl-tRNA synthetase-like protein"
FT                   /note="GenX; identified by match to protein family HMM
FT                   PF00152; match to protein family HMM PF00587; match to
FT                   protein family HMM TIGR00462"
FT                   /db_xref="GOA:A7FMZ1"
FT                   /db_xref="InterPro:IPR018149"
FT                   /db_xref="UniProtKB/Swiss-Prot:A7FMZ1"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABS48580.1"
FT                   /translation="MSDTASWQPSAPIANLLKRAAIMAEIRRFFADRGVLEVETPTMSQ
FT                   ATVTDIHLVPFETRFVGPGAADGLTLYMMTSPEYHMKRLLAAGSGPIYQLGRSFRNEEA
FT                   GRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQILDCNSAETLSYQQAFLRHLNIDPLS
FT                   AEKAQLREVAAKLDLSNIADTEEDRDTLLQLLFTVGVEPYIGRDKPAFIYHFPASQASL
FT                   AEISTEDHRVAERFEVYFKGIELANGFRELTDGDEQLQRFEQDNRNRAKRGLPQNPIDM
FT                   NLIAALKQGLPDCSGVALGVDRLVMLALNAERLSDVIAFPVNIA"
XX
SQ   Sequence 978 BP; 247 A; 218 C; 263 G; 250 T; 0 other; 1246528876 CRC32;
     atgagcgaca cggcaagctg gcagccaagt gcacctatcg ccaatttgtt gaagcgcgca        60
     gcaataatgg cagagattcg gcgctttttc gccgatcggg gcgtattaga agtagaaacg       120
     ccaaccatga gccaagcgac agttacggac attcatttag ttccattcga aacccggttt       180
     gttggcccgg gcgctgccga tggtttgacg ctgtacatga tgaccagccc ggaatatcac       240
     atgaagcggt tgttagcggc gggcagtggc cctatctatc aactgggccg cagtttccgc       300
     aatgaagagg ctggccgcta tcataatcct gaattcacca tgctggaatg gtaccgccct       360
     cattatgata tgtatcgttt aatgaatgag gtggatgacc tgttgcagca aattttggat       420
     tgcaacagcg cagagacctt atcctatcag caagcgtttt tgcgccattt aaatattgat       480
     ccgttgtctg ctgaaaaagc acaattgcgt gaagtggcgg caaaactgga tttaagcaat       540
     attgcggata ccgaagaaga tcgcgatacg ttgctgcaat tgttgtttac tgtgggtgtc       600
     gaaccttata ttggccgtga taaaccggca tttatttatc atttcccggc atcgcaggca       660
     tctctggctg aaatcagtac cgaagaccac cgtgtggcgg aacgctttga ggtgtacttc       720
     aaggggatag aactagcgaa tggtttccga gagctgactg acggtgatga gcaactgcaa       780
     cgctttgagc aggataaccg taaccgtgcg aaacggggct taccacagaa cccaatcgat       840
     atgaatctta tcgcagcact aaagcagggt ttacccgatt gttcaggtgt ggctttaggg       900
     gttgatcgct tggtgatgct ggcgttaaat gcggaaaggt tgagtgatgt tattgccttc       960
     cccgtcaata tcgcctaa                                                     978
//
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