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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABR59418; SV 1; linear; genomic DNA; STD; PRO; 1650 BP.
XX
PA   CP000738.1
XX
DE   Sinorhizobium medicae WSM419 choline dehydrogenase
XX
OS   Sinorhizobium medicae WSM419
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
OC   Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=366394;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1650
FT                   /organism="Sinorhizobium medicae WSM419"
FT                   /strain="WSM419"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CP000738.1:608815..610464)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="Smed_0562"
FT                   /product="choline dehydrogenase"
FT                   /note="TIGRFAM: choline dehydrogenase PFAM:
FT                   glucose-methanol-choline oxidoreductase; FAD dependent
FT                   oxidoreductase; GMC oxidoreductase KEGG: sme:SMc00093
FT                   choline dehydrogenase CHD oxidoreductase flavoprotein FAD
FT                   membrane"
FT                   /db_xref="GOA:A6U6Y8"
FT                   /db_xref="InterPro:IPR007867"
FT                   /db_xref="UniProtKB/Swiss-Prot:A6U6Y8"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABR59418.1"
FT                   /translation="MQADFVIIGSGSAGSALAYRLSEDGANSVVVLEFGGSDVGPFIQM
FT                   PAALAWPMSMNRYNWGYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFDR
FT                   WEELGAKGWAYADVLPYYKRMEHSHGGEEGWRGTDGPLHVQRGPVKNPLFHAFIEAGKQ
FT                   AGFEVTEDYNGSKQEGFGLMEQTTWRGRRWSAASAYLRPALKRPNVELVRCFARKIVIE
FT                   NGRATGVEIERGGRTEVVRANREVIVSASSFNSPKLLMLSGIGPAAHLQEMGIDVKADR
FT                   PGVGQNLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLFFKRGLGISNQFESCAF
FT                   LRSAPGVKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGDVTLRSSDPKAD
FT                   PVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDLYRGPEIQPGEKVRTDEEIDAFLRE
FT                   HLESAYHPCGTCKMGAKDDPMAVVDPETRVIGVDGLRVADSSIFPHITYGNLNAPSIMT
FT                   GEKAADHILGKQPLARSNQEPWINPRWAVSDR"
XX
SQ   Sequence 1650 BP; 303 A; 534 C; 514 G; 299 T; 0 other; 600321812 CRC32;
     atgcaggcag atttcgtcat catcggttcc ggctcggcgg gctcggccct cgcctatcgc        60
     ctgtcggaag acggcgcgaa ttcggtcgtc gtgctcgaat tcggcggctc ggacgtcggc       120
     ccgttcattc agatgccggc ggcgctggcc tggccgatga gcatgaaccg ttataattgg       180
     ggctacctct ccgaacccga gccgaacctc aacaaccggc gcatcaccgc gccgcgcggc       240
     aaggtgatcg gcggctcctc ttcgatcaac ggcatggtct atgtccgcgg gcactcggaa       300
     gacttcgacc ggtgggaaga actcggcgca aaaggctggg cctatgcgga cgtgctgccc       360
     tattacaagc ggatggagca ttcgcacggg ggcgaggagg gttggcgcgg caccgacgga       420
     ccgctgcacg tgcagcgcgg cccggtcaag aatccccttt tccacgcctt catcgaggcc       480
     ggaaagcagg ccggcttcga ggtcacggag gactacaacg gctcgaagca ggaagggttc       540
     gggttgatgg agcagacgac atggcggggc cgccgctggt cggccgcatc cgcctatttg       600
     aggccagcgc tcaagcgccc gaatgtcgag ctcgtccggt gcttcgcccg caagatcgtt       660
     atcgagaacg gccgggcgac cggcgtggag atcgagcgcg gcggccgcac cgaggtcgtc       720
     agggccaatc gcgaggtgat cgtctccgcc tcctccttca actcgccgaa gctcctgatg       780
     ctctccggca tcggccccgc cgcgcatttg caggagatgg gcatcgacgt gaaggccgac       840
     cggcccggcg tcggccagaa cctgcaggac cacatggaat tctatttcca gcaggtgagc       900
     accaagccgg tttcgctata ttcttggctg ccatggttct ggcagggcgt tgccggggca       960
     caatggctct tcttcaaaag aggcctcggc atttccaacc agttcgagtc ctgcgccttc      1020
     ctgcgctcgg cgcccggcgt caaacagccg gacatccagt atcatttcct tcccgtcgcc      1080
     atcagttatg acggcaaggc ggcagcgaag tcgcacggct tccaggtgca tgtcggctac      1140
     aatctctcca agtcgcgcgg cgacgtcacg cttcgctcgt ccgatccgaa agccgacccg      1200
     gtgatccgct tcaactatat gagccatccc gaggactggg agaagtttcg ccattgcgtg      1260
     cggctgaccc gcgagatttt cggccagaag gcgttcgacc tctatcgtgg cccggaaatc      1320
     cagccgggcg agaaggtccg gaccgacgag gagatcgacg cctttctgcg cgagcatctc      1380
     gaaagcgcct atcacccctg cggcacctgc aagatgggcg cgaaggacga cccgatggcc      1440
     gtggtcgacc cggaaacccg cgtcatcggt gtcgatggcc ttcgcgttgc cgattcctcg      1500
     attttcccgc atatcaccta tggcaatctg aacgctccct cgatcatgac cggcgaaaag      1560
     gccgccgacc acatcctcgg gaagcagcct ctcgcccgtt ccaaccagga accctggatc      1620
     aatccgcgct gggcggtgag cgatcggtag                                       1650
//
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