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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABP83251; SV 1; linear; genomic DNA; STD; PRO; 1698 BP.
XX
PA   CP000680.1
XX
DE   Pseudomonas mendocina ymp choline dehydrogenase
XX
OS   Pseudomonas mendocina ymp
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=399739;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1698
FT                   /organism="Pseudomonas mendocina ymp"
FT                   /strain="ymp"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CP000680.1:514463..516160)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="Pmen_0481"
FT                   /product="choline dehydrogenase"
FT                   /note="TIGRFAM: choline dehydrogenase PFAM:
FT                   glucose-methanol-choline oxidoreductase; GMC
FT                   oxidoreductase"
FT                   /db_xref="GOA:A4XPI5"
FT                   /db_xref="InterPro:IPR007867"
FT                   /db_xref="UniProtKB/Swiss-Prot:A4XPI5"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABP83251.1"
FT                   /translation="MSHEFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDF
FT                   RTQMPAALAFPLQGRRYNWAYETDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAL
FT                   DFDNWAKAKGLEDWTYHDCLPYFRKAESRDIGPNDYHGGDGPVSVTTPKAGNNPLFHAM
FT                   VEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARERPNLTIVTHA
FT                   TTDRILFDGKRASGVSYLIGNANDATEARARREVLLCAGAIASPQILQRSGVGPAALLR
FT                   ELDIALVHELPGVGQNLQDHLEMYLQYACTQPVSLYPALKLLNQPGIGAQWLFTGNGIG
FT                   ASNQFEAGGFIRTRPEFAWPNIQFHFLPVAINYNGSNAVNEHGFQAHVGSMRSPSRGRI
FT                   QLKSKDPRQHPSILFNYMSHEQDWQEFRDAIRITREIMAQPALDSYRGREISPGIDCQS
FT                   DAELDAFIREHAETAFHPSCSCKMGEDDMAVVDGQGRVHGVQGLRVVDASIMPEIITGN
FT                   LNATTIMMAEKIADRIRDRQPLPRSNAPYFVAGERPVRGQPQRAVSAA"
XX
SQ   Sequence 1698 BP; 313 A; 644 C; 511 G; 230 T; 0 other; 3412678184 CRC32;
     atgtcgcacg aattcgatta catcatcatc ggcgccggtt cggccggtaa cgtcctggcc        60
     acccgcctga ccgaagacgc cgacgtcagc gtgctgctgc tggaagccgg cggccccgac       120
     tatcgcctgg atttccgcac ccagatgccc gccgccctgg cctttccgct gcagggccgg       180
     cgctacaact gggcctacga gaccgacccc gagccgcaca tgaacaaccg ccgcatggag       240
     tgcggacgcg gcaagggcct gggcggctcc tcgctgatca acggcatgtg ctacatccgc       300
     ggcaacgccc tggacttcga caactgggcc aaggccaagg gcctggaaga ctggacctac       360
     cacgactgcc tgccctactt ccgcaaggca gaaagccgcg acatcggccc caacgactac       420
     cacggcggcg acggcccggt cagcgtgacc acgcccaagg ccggcaacaa cccgctgttc       480
     cacgccatgg tcgaggccgg cgtgcaggcc ggctacccgc gtaccgatga cctcaacggc       540
     taccagcagg aaggcttcgg cccgatggac cgcaccgtca ccccgcaggg ccggcgcgcc       600
     agcaccgcgc ggggctacct ggaccaggca cgggagcgcc ccaacctgac catcgtcacc       660
     catgccacca ccgaccgcat cctcttcgac ggcaagcgcg ccagcggcgt cagctacctg       720
     atcggcaacg ccaacgatgc caccgaagcc cgtgctcgcc gcgaagtgct gctatgcgcc       780
     ggcgccatcg cctcgccgca gatcctgcag cgctccggcg tcggccccgc cgcgctgctg       840
     cgcgagctgg acatcgccct ggtgcacgaa ctgcctggcg tcggccagaa cctgcaggat       900
     cacctggaga tgtacctgca gtacgcctgc acccaaccgg tgtcgctgta cccggcgctc       960
     aagctgctca accagcccgg catcggcgcg caatggctgt tcaccggcaa cggcatcggc      1020
     gccagcaacc agttcgaggc cggcggcttc atccgcaccc gtccggagtt cgcctggccc      1080
     aacatccagt tccacttcct gccggtggcg atcaactaca acggcagcaa cgcggtgaac      1140
     gagcacggct tccaggccca cgtcggctcc atgcgctcgc ccagccgcgg gcgcatccag      1200
     ctcaagtcga aagacccgcg ccagcacccg agcatcctgt tcaactacat gagtcatgag      1260
     caggactggc aggagttccg cgacgccatc cgcatcaccc gcgagatcat ggctcagccg      1320
     gcgctcgact cctaccgcgg ccgcgagatc agccccggta tcgactgcca gagcgacgcc      1380
     gaactggatg ccttcatccg cgaacatgcg gaaaccgcct tccatccgtc ctgctcgtgc      1440
     aagatgggcg aggacgacat ggcggtggtc gacggccagg gccgcgtgca cggcgtgcag      1500
     gggctgcgcg tggtggacgc ctcgatcatg ccggagatca tcaccggcaa cctcaacgcc      1560
     accaccatca tgatggccga gaagatcgcc gaccggattc gcgaccgtca gccgctgccg      1620
     cgcagcaacg caccctactt cgtcgccggc gagcggccgg tgcgcggcca accgcagcgc      1680
     gcggtatcgg cggcctga                                                    1698
//
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