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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABN06794; SV 1; linear; genomic DNA; STD; PRO; 1641 BP.
XX
PA   CP000559.1
XX
DE   Methanocorpusculum labreanum Z DNA ligase I, ATP-dependent Dnl1
XX
OS   Methanocorpusculum labreanum Z
OC   Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales;
OC   Methanocorpusculaceae; Methanocorpusculum.
OX   NCBI_TaxID=410358;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1641
FT                   /organism="Methanocorpusculum labreanum Z"
FT                   /strain="Z"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CP000559.1:595504..597144)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="Mlab_0620"
FT                   /product="DNA ligase I, ATP-dependent Dnl1"
FT                   /EC_number="6.5.1.1"
FT                   /note="TIGRFAM: DNA ligase I, ATP-dependent Dnl1 PFAM: DNA
FT                   ligase domain protein; ATP dependent DNA ligase domain
FT                   protein; ATP dependent DNA ligase"
FT                   /db_xref="GOA:A2SR38"
FT                   /db_xref="InterPro:IPR012340"
FT                   /db_xref="UniProtKB/Swiss-Prot:A2SR38"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABN06794.1"
FT                   /translation="MQFVEFAEICNTIEGTSSRLATADILAEKFPLLTEEELPVFVRFM
FT                   RGRLFPDWSSEKLGFGPNLLYDALAYVIGKKRSYVVSAINNAGDIGKVVESLIEKREQT
FT                   MFFSEELDLLDVNARFLQMAKSSGRRSQQERLRSAQYLLSNATPLEGRYLARLMLEEMR
FT                   IGVGEGVVKDAVSKAFGVPSDIVEHAHQALNDLGEVAFLAKTDPSRLSNVHITAFRPVK
FT                   MMLAQQGSITSMVETHGTLAAENKYDGSRFQFHKSGGKCAIYSRRLEEMTASLPDVVKM
FT                   LDKATDHDVIIDGEVIAIMNGKPMPFQTILRRIRRKHDVGDAQEAITLLPWVFDILAAD
FT                   GETLIDLPFRERRKILESVMNAYVAPQLVSDSAEEIEAYYHSSLDNGNEGIMLKVLDSP
FT                   YLPGNRGKLWIKIKPEVDTIDLVVTAAEWGEGKRAKMFGSFLLACQDENGDLLEISRVA
FT                   TGIDDSMLSTLYDLFKDKIIAEKGKTVTFEPDVVFEVGYAELQKSTNYEAGYALRFPRF
FT                   VRLRDDKDVSEIETLESLTRRYSLQNKEE"
XX
SQ   Sequence 1641 BP; 389 A; 418 C; 469 G; 365 T; 0 other; 60256022 CRC32;
     atgcagtttg tcgagtttgc agagatatgt aatacgatcg agggaacatc ctcgcgtctt        60
     gcgacggccg atattctggc cgaaaaattt cctctactca ccgaagagga actgcccgtc       120
     ttcgtcagat tcatgcgggg aagactcttt cccgactggt cgtccgagaa gctcgggttc       180
     ggcccgaatc ttttgtatga tgcccttgcc tacgtcatcg gtaaaaagcg gagttatgtg       240
     gtctcggcga tcaacaacgc aggtgatatc ggtaaagtcg tcgagagtct tatcgaaaaa       300
     cgggagcaga cgatgttttt ctcggaagaa ctggatcttc tggatgtgaa cgcccggttt       360
     ctgcagatgg caaaatcctc gggaagacga tctcagcagg agcggctgag atccgcccag       420
     tatcttcttt cgaacgcaac gccgcttgag gggagatacc ttgcccgtct catgctcgaa       480
     gagatgcgga tcggtgttgg agaaggcgtc gtaaaagacg cggtctcaaa agcgttcggc       540
     gttccgtcag acattgtcga acacgctcat caggctctca acgacctcgg agaggtggcg       600
     ttcctcgcaa aaaccgaccc ctcccggctt tccaatgttc atatcaccgc gtttcgcccg       660
     gtaaaaatga tgcttgccca gcagggctcc atcacctcga tggtcgaaac gcatggaaca       720
     ctcgctgcgg aaaacaaata cgacggcagc agattccagt tccataaatc cggcgggaag       780
     tgtgcgatct actccaggcg tcttgaagag atgacggcgt cacttcccga tgttgttaag       840
     atgctggata aggcgaccga tcatgacgtc atcatcgacg gcgaggtgat cgcgatcatg       900
     aatggaaaac ccatgccttt ccagacaatc cttcggcgga tccgcaggaa gcatgatgtc       960
     ggggatgcgc aggaggcaat cacccttctt ccctgggtgt tcgatatcct tgctgccgac      1020
     ggagagaccc tgatcgatct gccctttagg gagcggcgca agatccttga atccgtcatg      1080
     aatgcgtatg tcgcaccgca gctcgtcagc gactccgcag aagagatcga agcgtattac      1140
     cactcctcgc tcgacaatgg gaatgaaggg atcatgctca aagtgctcga ctcgccgtat      1200
     cttccgggaa atcgtggcaa gctctggatc aagatcaagc ccgaggtcga tacgatcgac      1260
     ctggtggtga cggcggccga gtggggcgaa ggaaaacgtg cgaagatgtt cggctcgttc      1320
     cttcttgcct gtcaggatga gaacggcgac cttctggaga tctcgcgggt ggcgaccggt      1380
     atcgacgact ctatgctttc gaccctgtat gatcttttca aagacaagat cattgccgaa      1440
     aagggaaaga ccgtgacctt cgaaccggat gtggtctttg aggtggggta tgcggaactg      1500
     cagaaaagta cgaattacga ggccgggtat gctctccggt tcccgcgttt tgtcaggctt      1560
     agggacgaca aggatgtctc ggagatcgag acgctggaaa gcctgacccg ccggtattct      1620
     ctgcagaata aggaagagta a                                                1641
//
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