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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABM24781; SV 1; linear; genomic DNA; STD; PRO; 1518 BP.
XX
PA   CP000503.1
XX
DE   Shewanella sp. W3-18-1 L-arabinose isomerase
XX
OS   Shewanella sp. W3-18-1
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=351745;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1518
FT                   /organism="Shewanella sp. W3-18-1"
FT                   /strain="W3-18-1"
FT                   /mol_type="genomic DNA"
FT   CDS             CP000503.1:2251273..2252790
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="Sputw3181_1946"
FT                   /product="L-arabinose isomerase"
FT                   /EC_number="5.3.1.4"
FT                   /note="PFAM: L-arabinose isomerase; KEGG: shm:Shewmr7_1995
FT                   L-arabinose isomerase"
FT                   /db_xref="GOA:A1RJD6"
FT                   /db_xref="InterPro:IPR003762"
FT                   /db_xref="UniProtKB/Swiss-Prot:A1RJD6"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="ABM24781.1"
FT                   /translation="MRESDMKAFKQKQVWFVTGSQDLYGPKVLEQVAKNSEQIVNGFNQ
FT                   SDAISMEVVYKPTVKSPREIYAVCQAANSDENCVGIILWMHTFSPAKMWIAGLNELSKP
FT                   FMHLHTQFNAELPWADINMNYMNTHQSAHGCREFGYIGTRMRKERKVVVGHWQTNDVQA
FT                   QVDDWCRAAAGWNESQNLRIARFGDNMRQVAVTEGDKVAAQIQFGYEVHAYSLGELNDA
FT                   INAISENDITAQIDRYASEYIISNELFNDEYQLDRLRKEAKIELGLAQFLKDGEFGAFT
FT                   NCFENLTGMTGLPGLATQRLMANGIGYGGEGDWKTAAMVRIMKVMGQGRVGGTSFMEDY
FT                   TYNFGATDQVLGAHMLEVCPSIAASKPRLEVHRHTIGVRCDVPRLLFTAKAGPAINVST
FT                   IDLGNRFRIILNELDTVTPPQDLPNLPVASALWEPRPNLSIAAAAWIHAGGAHHSAYSQ
FT                   AISTENIVDFAEMAGAELVIIDADTQIRQFKNELRQNSVYYGLARGL"
XX
SQ   Sequence 1518 BP; 431 A; 327 C; 385 G; 375 T; 0 other; 254202237 CRC32;
     atgagagaga gcgatatgaa agcattcaaa caaaaacaag tgtggtttgt cacgggttcg        60
     caggatttgt acgggcccaa agtgttagag caagtcgcaa aaaacagtga acaaattgtc       120
     aacggattta atcagtctga tgcaatttca atggaagttg tctataaacc cacggttaaa       180
     tctccccgcg aaatttacgc ggtgtgccaa gctgctaaca gcgacgaaaa ctgtgtcggg       240
     attatcctgt ggatgcacac tttctcgcca gccaaaatgt ggattgcggg actgaatgaa       300
     ctcagcaaac cctttatgca tttgcatact caatttaatg ccgaactgcc gtgggccgac       360
     attaatatga actacatgaa cacccatcaa agtgcccacg gttgccgcga gtttggttat       420
     atcggcaccc ggatgcgtaa agaacgcaaa gtggttgtag ggcattggca aacaaacgat       480
     gtacaagccc aagtggatga ttggtgccgc gcggcagcag gctggaacga aagtcaaaat       540
     cttcgtattg ctcgctttgg tgacaatatg cgccaagtgg ctgtgaccga aggtgataaa       600
     gttgcggcac aaattcaatt cggttacgaa gtgcatgcct acagtttagg cgaactcaat       660
     gatgccatta atgccattag cgaaaatgat atcacggctc aaatcgaccg ctatgcgagc       720
     gaatatatta ttagcaacga attgtttaat gatgaatacc aactcgatcg tttaagaaaa       780
     gaagccaaaa tcgaactcgg gttagcgcag ttcttaaagg atggcgagtt tggtgctttt       840
     acgaactgct ttgaaaactt aacgggaatg acgggattac cagggttagc gacacagcgt       900
     ttgatggcca atggtattgg ctatggcggc gaaggtgatt ggaaaactgc cgcgatggta       960
     cgcatcatga aagtgatggg acaaggccgt gttggaggta cttcctttat ggaggattac      1020
     acctataact tcggtgcgac ggatcaagtg ctcggcgcac atatgctcga agtgtgtccg      1080
     tctattgctg ctagcaaacc acgtttagaa gtgcatcgcc acactatagg tgtgcgctgt      1140
     gatgtgccac gcttactgtt tacggcgaaa gcggggcctg ccatcaacgt atcgacaatc      1200
     gatcttggta atcgtttccg tattatcctc aacgaattag acacagtgac accgccacag      1260
     gatttaccaa acttacctgt tgcttctgca ctttgggaac cgcgtccaaa tttgtcaatt      1320
     gcagcagcgg cgtggatcca tgcgggcggc gcgcatcact cggcctacag ccaagcgata      1380
     tcgactgaaa acattgtcga ttttgctgaa atggcggggg ctgaattagt gattattgat      1440
     gccgacactc aaattcgtca gttcaaaaat gaattacgtc aaaattccgt ttattacggc      1500
     ctagcaagag ggctataa                                                    1518
//
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