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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABL05408; SV 1; linear; genomic DNA; STD; PRO; 1557 BP.
XX
PA   CP000325.1
XX
DE   Mycobacterium ulcerans Agy99 succinate-semialdehyde dehydrogenase [NADP+]
DE   dependent (SsdH) GabD2
XX
OS   Mycobacterium ulcerans Agy99
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium.
OX   NCBI_TaxID=362242;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1557
FT                   /organism="Mycobacterium ulcerans Agy99"
FT                   /strain="Agy99"
FT                   /mol_type="genomic DNA"
FT                   /country="Ghana:Ga district"
FT                   /isolation_source="human tissue biopsy"
FT                   /collection_date="Jul-1999"
FT   CDS             complement(CP000325.1:3557527..3559083)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="gabD2"
FT                   /locus_tag="MUL_3190"
FT                   /product="succinate-semialdehyde dehydrogenase [NADP+]
FT                   dependent (SsdH) GabD2"
FT                   /note="Detected in the membrane fraction by proteomics (LC-
FT                   MS/MS); cytoplasmic protein; involved in 4-aminobutyrate
FT                   (GabA) degradation pathway [catalytic activity: succinate
FT                   semialdehyde + NAD(P)(+) + H(2)O = succinate + NAD(P)H]"
FT                   /db_xref="GOA:A0PST9"
FT                   /db_xref="InterPro:IPR015590"
FT                   /db_xref="UniProtKB/Swiss-Prot:A0PST9"
FT                   /inference="protein motif:CDD:COG1012"
FT                   /inference="similar to AA sequence:RefSeq:NP_214748.1"
FT                   /experiment="confirmed by proteomics"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABL05408.1"
FT                   /translation="MPVPSSAVFECLLSLAAIKDVDARPTRTIDEVFTGKPLTTIPVGT
FT                   AEDVEAAFAEAREAQANWAKRPVSERAEVIRRYRDLVIENREFLMDLLQAEAGKARWAA
FT                   QEEVVDLVANANYYARVSAGLLKPRTVQALLPGIGKTTVGYQPKGVVGVISPWNYPMTL
FT                   TASDSVPALIAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAIA
FT                   DNCDYLMFTGSSATGSRLAERAGRRLIGFSAELGGKNAMIVTRGVNLDKVAKAATRACF
FT                   SNAGQLCISIERIYVEKDIADEFTRKFGDAVRSMKLGTAYDFSVDMGSLISEGQLKTVS
FT                   GHVDDATAKGAKVIAGGKARPDVGPLFYEPTVLTDVTHEMECADNETFGPLVSIYPVAD
FT                   VEEAVEKANDTEYGLNASVWAGSTPEGEKIAARLRSGTVNVNEGYAFAWGSLSAPMGGM
FT                   GISGVGRRHGPEGLLKYTESQTIATARVFNLDPPMGVPPTLWQKSLLPIVRTVMKLPGR
FT                   K"
XX
SQ   Sequence 1557 BP; 281 A; 501 C; 527 G; 248 T; 0 other; 3799918024 CRC32;
     atgcctgttc cgtcatccgc ggtcttcgag tgtctactga gccttgccgc gatcaaggac        60
     gtcgatgctc gtccgacccg gaccatcgac gaggtcttta ctggcaaacc gttgaccacc       120
     atcccggtcg gcaccgccga agacgtcgag gcagcgtttg ccgaagctcg cgaggcacag       180
     gccaactggg cgaagcgtcc ggtcagcgaa cgcgcggagg tcatccgccg ctaccgcgat       240
     ctggtcatcg agaaccgcga gtttctgatg gacctgctgc aggccgaggc gggcaaggcg       300
     cgctgggcgg cgcaggagga agtcgtcgac ctggtggcca acgccaacta ctacgcacgc       360
     gtgtccgcgg gcctgctaaa gccccgcacg gtacaggcgc tgctgcccgg gatcggcaag       420
     accacagtcg gctaccagcc caaaggcgtg gtcggggtga tttcgccatg gaattacccc       480
     atgacgctca cggcgtcgga ctcggttccc gcgttgatcg cgggtaacgc ggtggtgctc       540
     aagccggaca gccagacgcc gtactgcgca ctggcgtgcg ccgagctgct gtaccgggcc       600
     ggcctgccgc gcgcgctgta tgcgatcgtg ccgggcccgg gctcggtggt gggtaccgcg       660
     atcgccgata actgcgacta cctgatgttc accggttcgt cggcgacggg cagccggctc       720
     gccgagcgcg ccggccgtcg gctcatcggt ttctcggccg aactgggcgg caagaacgcg       780
     atgatcgtga cgcgcggcgt caacctcgac aaggtggcca aggcggccac ccgcgcctgc       840
     ttctccaacg cgggccaatt gtgcatctcg atcgagcgga tctacgtcga gaaagacatc       900
     gccgacgagt tcacccgcaa gttcggcgat gcggtgcgaa gcatgaagct cggtaccgcc       960
     tacgacttct cggtcgacat gggcagcctg atctccgagg gacagctcaa gaccgtgtcc      1020
     ggccacgtgg atgacgcaac ggccaagggc gccaaggtga ttgcgggtgg caaggctcga      1080
     cccgatgtcg ggccgctgtt ctacgagccg accgtgctga ccgatgtcac ccacgaaatg      1140
     gaatgcgcgg acaacgaaac gtttgggccg ctcgtctcga tctacccggt tgccgacgtc      1200
     gaggaagccg ttgagaaggc caacgacacc gaatacgggc tcaacgccag cgtatgggcg      1260
     ggctcgaccc ccgaggggga gaagatcgcc gcccggttgc ggtcgggaac ggtgaacgtc      1320
     aacgagggct atgccttcgc ctggggaagc ctgagcgcac cgatgggcgg catgggaatc      1380
     tctggggtcg gccgcaggca cggccccgag gggctgctca agtacaccga atcgcagacg      1440
     atcgccaccg cgcgggtatt caacctcgat ccgccgatgg gcgtcccgcc caccctctgg      1500
     cagaagtcgc tcttgccgat cgtgcgcacg gtgatgaagc tgcccgggcg gaagtga         1557
//
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